WormFlux: mechanistic analysis of C. elegans metabolism

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? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
* : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.

Network Biomass WormPaths

FBAFlux Balance Analysis PEAPathway Enrichment Analysis

WormClustClustering- and enrichment-based association of genes with the metabolic network

Metabolite Overview

Abbreviation .....................................................	:	gtp
Name .....................................................	:	GTP, etc.Guanosine 5'-triphosphate
Model ID .....................................................	:	C00044
KEGG ID (?) Compounds in KEGG database that match this compound. .....................................................	:	C00044
Formula .....................................................	:	C10H12N5O14P3
Charge .....................................................	:	-4
Localization .....................................................	:	Mitochondria, Cytosol
BiGG matches (?) Compounds in BiGG database that match this compound. .....................................................	:	gtp
Other associations .....................................................	:	See reaction table below (18 reactions in total)

In WormPaths (?) Pathway maps where this metabolite is represented are listed here. Letters after map name indicate the compartments the metabolite is placed in the map: (c) Cytosol (m) Mitochondria (e) Extracellular space .....................................................	:	Go to map

iCEL1314

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Reactions

ID

Enzyme

Reactants

Products

Genes (?) Multiple genes are separated by OR (I) or AND (&).

I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
& indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.

Pathway

RM00432Name: Succinate:CoA ligase (GDP-forming) Type: Regular Location: Mitochondria KEGG ID: R00432 click to see details on this item	6.2.1.4Name: succinate---CoA ligase (GDP-forming) Other names: succinyl-CoA synthetase (GDP-forming), succinyl coenzyme A synthetase (guanosine diphosphate-forming), succinate thiokinase, succinic thiokinase, succinyl coenzyme A synthetase, succinate-phosphorylating enzyme, P-enzyme, SCS, G-STK, succinyl coenzyme A synthetase (GDP-forming), succinyl CoA synthetase, succinyl coenzyme A synthetase click to see details on this item	[m] : gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item + succName: Succinate Formula: C4H4O4 Charge: -2 click to see details on this item + coaName: Coenzyme A Formula: C21H32N7O16P3S Charge: -4 click to see details on this item		gdpName: GDP Formula: C10H12N5O11P2 Charge: -3 click to see details on this item + piName: Phosphate Formula: HO4P Charge: -2 click to see details on this item + succoaName: Succinyl-CoA Formula: C25H35N7O19P3S Charge: -5 click to see details on this item	(sucl-1 \| sucl-2) & sucg-1	TCA cycle
RCC0170Name: Procollagen synthesis (unmodified protein) Type: Regular Location: Cytosol KEGG ID: NA click to see details on this item	Not applicable	[c] : (2.0) gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item + (0.324) atpName: ATP Formula: C10H12N5O13P3 Charge: -4 click to see details on this item + (2.324) h2oName: H2O Formula: H2O Charge: 0 click to see details on this item + (0.072072) alatrnaName: L-Alanyl-tRNA(Ala) Formula: C3H7NO2R Charge: 1 click to see details on this item + (0.048116) argtrnaName: L-Arginyl-tRNA(Arg) Formula: C6H15N4O2R Charge: 2 click to see details on this item + (0.033015) asntrnaName: L-Asparaginyl-tRNA(Asn) Formula: C4H8N2O3R Charge: 1 click to see details on this item + (0.049284) asptrnaName: L-Aspartyl-tRNA(Asp) Formula: C4H6NO4R Charge: 0 click to see details on this item + (0.027047) cystrnaName: L-Cysteinyl-tRNA(Cys) Formula: C3H7NO2SR Charge: 1 click to see details on this item + (0.049537) glutrnaName: L-Glutamyl-tRNA(Glu) Formula: C5H8NO4R Charge: 0 click to see details on this item + (0.046288) glntrnaName: L-Glutaminyl-tRNA(Gln) Formula: C5H10N2O3R Charge: 1 click to see details on this item + (0.195952) glytrnaName: Glycyl-tRNA(Gly) Formula: C2H5NO2R Charge: 1 click to see details on this item + (0.014203) histrnaName: L-Histidyl-tRNA(His) Formula: C6H9N3O2R Charge: 1 click to see details on this item + (0.027694) iletrnaName: L-Isoleucyl-tRNA(Ile) Formula: C6H13NO2R Charge: 1 click to see details on this item + (0.033232) leutrnaName: L-Leucyl-tRNA(Leu) Formula: C6H13NO2R Charge: 1 click to see details on this item + (0.036365) lystrnaName: L-Lysine-tRNA (Lys) Formula: C6H15N2O2R Charge: 2 click to see details on this item + (0.017249) mettrnaName: L-Methionyl-tRNA (Met) Formula: C5H11NO2SR Charge: 1 click to see details on this item + (0.017276) phetrnaName: L-Phenylalanyl-tRNA(Phe) Formula: C9H11NO2R Charge: 1 click to see details on this item + (0.167533) protrnaName: L-Prolyl-tRNA(Pro) Formula: C5H9NO2R Charge: 1 click to see details on this item + (0.051072) sertrnaName: L-Seryl-tRNA(Ser) Formula: C3H7NO3R Charge: 1 click to see details on this item + (0.042924) thrtrnaName: L-Threonyl-tRNA(Thr) Formula: C4H9NO3R Charge: 1 click to see details on this item + (0.004785) trptrnaName: L-Tryptophanyl-tRNA(Trp) Formula: C11H12N2O2R Charge: 1 click to see details on this item + (0.022921) tyrtrnaName: L-Tyrosyl-tRNA(Tyr) Formula: C9H11NO3R Charge: 1 click to see details on this item + (0.043435) valtrnaName: L-Valyl-tRNA(Val) Formula: C5H11NO2R Charge: 1 click to see details on this item		(0.921682) pcollg_restName: Procollagen (unmodified portion) Formula: X Charge: 0 click to see details on this item + (0.006239) pcollglysName: Procollagen L-lysine (to be modified) Formula: XH Charge: 1 click to see details on this item + (0.072079) pcollgproName: Procollagen L-proline (to be modified) Formula: XH Charge: 0 click to see details on this item + (2.0) gdpName: GDP Formula: C10H12N5O11P2 Charge: -3 click to see details on this item + (0.324) adpName: ADP Formula: C10H12N5O10P2 Charge: -3 click to see details on this item + (3.324) hName: H+ Formula: H Charge: 1 click to see details on this item + (2.324) piName: Phosphate Formula: HO4P Charge: -2 click to see details on this item + (0.072072) trnaalaName: tRNA(Ala) Formula: ROH Charge: 0 click to see details on this item + (0.048116) trnaargName: tRNA(Arg) Formula: ROH Charge: 0 click to see details on this item + (0.033015) trnaasnName: tRNA(Asn) Formula: ROH Charge: 0 click to see details on this item + (0.049284) trnaaspName: tRNA(Asp) Formula: ROH Charge: 0 click to see details on this item + (0.027047) trnacysName: tRNA(Cys) Formula: ROH Charge: 0 click to see details on this item + (0.049537) trnagluName: tRNA (Glu) Formula: ROH Charge: 0 click to see details on this item + (0.046288) trnaglnName: tRNA(Gln) Formula: ROH Charge: 0 click to see details on this item + (0.195952) trnaglyName: tRNA(Gly) Formula: ROH Charge: 0 click to see details on this item + (0.014203) trnahisName: tRNA(His) Formula: ROH Charge: 0 click to see details on this item + (0.027694) trnaileName: tRNA(Ile) Formula: ROH Charge: 0 click to see details on this item + (0.033232) trnaleuName: tRNA(Leu) Formula: ROH Charge: 0 click to see details on this item + (0.036365) trnalysName: tRNA(Lys) Formula: ROH Charge: 0 click to see details on this item + (0.017249) trnametName: tRNA(Met) Formula: ROH Charge: 0 click to see details on this item + (0.017276) trnapheName: tRNA(Phe) Formula: ROH Charge: 0 click to see details on this item + (0.167533) trnaproName: tRNA(Pro) Formula: ROH Charge: 0 click to see details on this item + (0.051072) trnaserName: tRNA(Ser) Formula: ROH Charge: 0 click to see details on this item + (0.042924) trnathrName: tRNA(Thr) Formula: ROH Charge: 0 click to see details on this item + (0.004785) trnatrpName: tRNA(Trp) Formula: ROH Charge: 0 click to see details on this item + (0.022921) trnatyrName: tRNA(Tyr) Formula: ROH Charge: 0 click to see details on this item + (0.043435) trnavalName: tRNA(Val) Formula: ROH Charge: 0 click to see details on this item	Not applicable	Miscellaneous
RC00424Name: GTP cyclohydrolase I Type: Regular Location: Cytosol KEGG ID: R00428;R04639;R05046;R05048 click to see details on this item	3.5.4.16Name: GTP cyclohydrolase I Other names: GTP cyclohydrolase, guanosine triphosphate cyclohydrolase, guanosine triphosphate 8-deformylase, dihydroneopterin triphosphate synthase, GTP 8-formylhydrolase click to see details on this item	[c] : gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item		ahdtName: "2-Amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)dihydropteridine triphosphate" Formula: C9H12N5O13P3 Charge: -4 click to see details on this item + forName: Formate Formula: CH1O2 Charge: -1 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item	cat-4	Folate biosynthesis
RC09394Name: cyclic pyranopterin phosphate synthase Type: Regular Location: Cytosol KEGG ID: R09394 click to see details on this item	4.1.99.18Name: cyclic pyranopterin phosphate synthase Other names: MOCS1A, MoaA, MoaC, molybdenum cofactor biosynthesis protein 1 click to see details on this item	[c] : gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item		cpmpName: Cyclic pyranopterin monophosphate Formula: C10H11N5O7P Charge: -1 click to see details on this item + ppiName: Diphosphate Formula: HO7P2 Charge: -3 click to see details on this item	F49E2.1 \| F49H6.5	Molybdenum cofactor biosynthesis
RC00885Name: GTP:alpha-D-mannose-1-phosphate guanylyltransferase Type: Regular Location: Cytosol KEGG ID: R00885 click to see details on this item	2.7.7.13Name: mannose-1-phosphate guanylyltransferase Other names: GTP-mannose-1-phosphate guanylyltransferase, PIM-GMP (phosphomannose isomerase-guanosine 5'-diphospho-D-mannose pyrophosphorylase), GDP-mannose pyrophosphorylase, guanosine 5'-diphospho-D-mannose pyrophosphorylase, guanosine diphosphomannose pyrophosphorylase, guanosine triphosphate-mannose 1-phosphate guanylyltransferase, mannose 1-phosphate guanylyltransferase (guanosine triphosphate) click to see details on this item	[c] : gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item + man1pName: D-Mannose 1-phosphate Formula: C6H11O9P Charge: -2 click to see details on this item		gdpmannName: GDP-D-mannose Formula: C16H23N5O16P2 Charge: -2 click to see details on this item + ppiName: Diphosphate Formula: HO7P2 Charge: -3 click to see details on this item	tag-335 \| Y47D9A.1	Fructose and mannose metabolism
RCC0139Name: GTP:alpha-D-glucose-1-phosphate guanylyltransferase Type: Regular Location: Cytosol KEGG ID: NA click to see details on this item	2.7.7.13Name: mannose-1-phosphate guanylyltransferase Other names: GTP-mannose-1-phosphate guanylyltransferase, PIM-GMP (phosphomannose isomerase-guanosine 5'-diphospho-D-mannose pyrophosphorylase), GDP-mannose pyrophosphorylase, guanosine 5'-diphospho-D-mannose pyrophosphorylase, guanosine diphosphomannose pyrophosphorylase, guanosine triphosphate-mannose 1-phosphate guanylyltransferase, mannose 1-phosphate guanylyltransferase (guanosine triphosphate) click to see details on this item	[c] : gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item + g1pName: D-Glucose 1-phosphate Formula: C6H11O9P Charge: -2 click to see details on this item		gdpgName: GDP-D-glucose Formula: C16H23N5O16P2 Charge: -2 click to see details on this item + ppiName: Diphosphate Formula: HO7P2 Charge: -3 click to see details on this item	tag-335 \| Y47D9A.1	Fructose and mannose metabolism
RC01951Name: fucose-1-phosphate guanylyltransferase Type: Regular Location: Cytosol KEGG ID: R01951 click to see details on this item	2.7.7.30Name: fucose-1-phosphate guanylyltransferase Other names: GDP fucose pyrophosphorylase, guanosine diphosphate L-fucose pyrophosphorylase, GDP-L-fucose pyrophosphorylase, GDP-fucose pyrophosphorylase, GTP:L-fucose-1-phosphate guanylyltransferase click to see details on this item	[c] : hName: H+ Formula: H Charge: 1 click to see details on this item + fuc1p-LName: L-Fucose 1-phosphate Formula: C6H11O8P Charge: -2 click to see details on this item + gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item		gdpfucName: GDP-L-fucose Formula: C16H23N5O15P2 Charge: -2 click to see details on this item + ppiName: Diphosphate Formula: HO7P2 Charge: -3 click to see details on this item	K03H1.13	Fructose and mannose metabolism
RC00431Name: GTP:oxaloacetate carboxy-lyase (adding GTP, phosphoenolpyruvate-forming) Type: Regular Location: Cytosol KEGG ID: R00431 click to see details on this item	4.1.1.32Name: phosphoenolpyruvate carboxykinase (GTP) Other names: phosphoenolpyruvate carboxylase, phosphopyruvate carboxylase, phosphopyruvate (guanosine triphosphate) carboxykinase, phosphoenolpyruvic carboxykinase (GTP), phosphopyruvate carboxylase (GTP), phosphoenolpyruvic carboxylase (GTP), phosphoenolpyruvic carboxykinase, phosphoenolpyruvate carboxykinase, PEP carboxylase, GTP:oxaloacetate carboxy-lyase (transphosphorylating) click to see details on this item	[c] : gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item + oaaName: Oxaloacetate Formula: C4H2O5 Charge: -2 click to see details on this item		gdpName: GDP Formula: C10H12N5O11P2 Charge: -3 click to see details on this item + pepName: Phosphoenolpyruvate Formula: C3H2O6P Charge: -3 click to see details on this item + co2Name: CO2 Formula: CO2 Charge: 0 click to see details on this item	pck-1 \| pck-2 \| pck-3	Glycolysis / gluconeogenesis
RC01135Name: IMP:L-aspartate ligase (GDP-forming) Type: Regular Location: Cytosol KEGG ID: R01135 click to see details on this item	6.3.4.4Name: adenylosuccinate synthase Other names: IMP---aspartate ligase, adenylosuccinate synthetase, succinoadenylic kinosynthetase, succino-AMP synthetase click to see details on this item	[c] : asp-LName: L-Aspartate Formula: C4H6NO4 Charge: -1 click to see details on this item + gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item + impName: IMP Formula: C10H11N4O8P Charge: -2 click to see details on this item		dcampName: "N6-(1,2-Dicarboxyethyl)-AMP" Formula: C14H14N5O11P Charge: -4 click to see details on this item + gdpName: GDP Formula: C10H12N5O11P2 Charge: -3 click to see details on this item + (2) hName: H+ Formula: H Charge: 1 click to see details on this item + piName: Phosphate Formula: HO4P Charge: -2 click to see details on this item	adss-1	Aspartate and asparagine metabolism
RC00330Name: ATP:GDP phosphotransferase Type: Regular Location: Cytosol KEGG ID: R00330 click to see details on this item	2.7.4.6Name: nucleoside-diphosphate kinase Other names: nucleoside 5'-diphosphate kinase, nucleoside diphosphate (UDP) kinase, nucleoside diphosphokinase, nucleotide phosphate kinase, UDP kinase, uridine diphosphate kinase click to see details on this item	[c] : atpName: ATP Formula: C10H12N5O13P3 Charge: -4 click to see details on this item + gdpName: GDP Formula: C10H12N5O11P2 Charge: -3 click to see details on this item		adpName: ADP Formula: C10H12N5O10P2 Charge: -3 click to see details on this item + gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item	R05G6.5 \| Y48G8AL.15 \| ndk-1	Purine metabolism
RC00426Name: GTP diphosphohydrolase (diphosphate-forming) Type: Regular Location: Cytosol KEGG ID: R00426 click to see details on this item	3.6.1.19Name: nucleoside-triphosphate diphosphatase Other names: nucleoside-triphosphate pyrophosphatase click to see details on this item	[c] : gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item		gmpName: GMP Formula: C10H12N5O8P Charge: -2 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item + ppiName: Diphosphate Formula: HO7P2 Charge: -3 click to see details on this item	hap-1	Purine metabolism
RC00335Name: GTP phosphohydrolase Type: Regular Location: Cytosol KEGG ID: R00335 click to see details on this item	3.6.5.5Name: dynamin GTPase click to see details on this item	[c] : gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item		gdpName: GDP Formula: C10H12N5O11P2 Charge: -3 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item + piName: Phosphate Formula: HO4P Charge: -2 click to see details on this item	drp-1 \| dyn-1	Miscellaneous
RC00434Name: GTP diphosphate-lyase (cyclizing, 3',5'-cyclic-GMP-forming) Type: Regular Location: Cytosol KEGG ID: R00434 click to see details on this item	4.6.1.1Name: adenylate cyclase Other names: adenylylcyclase, adenyl cyclase, 3',5'-cyclic AMP synthetase, ATP diphosphate-lyase (cyclizing) click to see details on this item 4.6.1.2Name: guanylate cyclase Other names: guanylyl cyclase, guanyl cyclase, GTP diphosphate-lyase (cyclizing) click to see details on this item	[c] : gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item		35cgmpName: "3',5'-Cyclic GMP" Formula: C10H11N5O7P Charge: -1 click to see details on this item + ppiName: Diphosphate Formula: HO7P2 Charge: -3 click to see details on this item	[(gcy-1 \| gcy-12 \| gcy-14 \| gcy-15 \| gcy-18 \| gcy-2 \| gcy-20 \| gcy-21 \| gcy-23 \| gcy-3 \| gcy-34 \| gcy-5 \| gcy-8) \| (gcy-17 \| gcy-28) \| (gcy-31 \| gcy-33 \| gcy-35 \| gcy-36 \| gcy-37)] \| (acy-1 \| acy-4) \| acy-2 \| (daf-11 \| gcy-19 \| gcy-22 \| gcy-25 \| gcy-29 \| gcy-32 \| gcy-4 \| gcy-9)	Miscellaneous
RM00335Name: GTP phosphohydrolase Type: Regular Location: Mitochondria KEGG ID: R00335 click to see details on this item	3.6.5.5Name: dynamin GTPase click to see details on this item	[m] : gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item		gdpName: GDP Formula: C10H12N5O11P2 Charge: -3 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item + piName: Phosphate Formula: HO4P Charge: -2 click to see details on this item	drp-1 \| eat-3	Miscellaneous
BIO0001Name: Protein synthesis (mitochondrial) Type: Biomass Location: Mitochondria KEGG ID: NA click to see details on this item	Not applicable	[m] : (2.0) gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item + (0.324) atpName: ATP Formula: C10H12N5O13P3 Charge: -4 click to see details on this item + (2.324) h2oName: H2O Formula: H2O Charge: 0 click to see details on this item + (0.111867) alatrnaName: L-Alanyl-tRNA(Ala) Formula: C3H7NO2R Charge: 1 click to see details on this item + (0.048846) argtrnaName: L-Arginyl-tRNA(Arg) Formula: C6H15N4O2R Charge: 2 click to see details on this item + (0.035405) asntrnaName: L-Asparaginyl-tRNA(Asn) Formula: C4H8N2O3R Charge: 1 click to see details on this item + (0.064946) asptrnaName: L-Aspartyl-tRNA(Asp) Formula: C4H6NO4R Charge: 0 click to see details on this item + (0.008665) cystrnaName: L-Cysteinyl-tRNA(Cys) Formula: C3H7NO2SR Charge: 1 click to see details on this item + (0.067386) glutrnaName: L-Glutamyl-tRNA(Glu) Formula: C5H8NO4R Charge: 0 click to see details on this item + (0.037694) glntrnaName: L-Glutaminyl-tRNA(Gln) Formula: C5H10N2O3R Charge: 1 click to see details on this item + (0.094618) glytrnaName: Glycyl-tRNA(Gly) Formula: C2H5NO2R Charge: 1 click to see details on this item + (0.01782) histrnaName: L-Histidyl-tRNA(His) Formula: C6H9N3O2R Charge: 1 click to see details on this item + (0.053231) iletrnaName: L-Isoleucyl-tRNA(Ile) Formula: C6H13NO2R Charge: 1 click to see details on this item + (0.082051) leutrnaName: L-Leucyl-tRNA(Leu) Formula: C6H13NO2R Charge: 1 click to see details on this item + (0.071622) lystrnaName: L-Lysine-tRNA (Lys) Formula: C6H15N2O2R Charge: 2 click to see details on this item + (0.020458) mettrnaName: L-Methionyl-tRNA (Met) Formula: C5H11NO2SR Charge: 1 click to see details on this item + (0.035592) phetrnaName: L-Phenylalanyl-tRNA(Phe) Formula: C9H11NO2R Charge: 1 click to see details on this item + (0.043238) protrnaName: L-Prolyl-tRNA(Pro) Formula: C5H9NO2R Charge: 1 click to see details on this item + (0.045815) sertrnaName: L-Seryl-tRNA(Ser) Formula: C3H7NO3R Charge: 1 click to see details on this item + (0.049868) thrtrnaName: L-Threonyl-tRNA(Thr) Formula: C4H9NO3R Charge: 1 click to see details on this item + (0.008944) trptrnaName: L-Tryptophanyl-tRNA(Trp) Formula: C11H12N2O2R Charge: 1 click to see details on this item + (0.026832) tyrtrnaName: L-Tyrosyl-tRNA(Tyr) Formula: C9H11NO3R Charge: 1 click to see details on this item + (0.075105) valtrnaName: L-Valyl-tRNA(Val) Formula: C5H11NO2R Charge: 1 click to see details on this item		prot_mitoName: Mitochondrial protein Formula: X Charge: 0 click to see details on this item + (2.0) gdpName: GDP Formula: C10H12N5O11P2 Charge: -3 click to see details on this item + (0.324) adpName: ADP Formula: C10H12N5O10P2 Charge: -3 click to see details on this item + (3.324) hName: H+ Formula: H Charge: 1 click to see details on this item + (2.324) piName: Phosphate Formula: HO4P Charge: -2 click to see details on this item + (0.111867) trnaalaName: tRNA(Ala) Formula: ROH Charge: 0 click to see details on this item + (0.048846) trnaargName: tRNA(Arg) Formula: ROH Charge: 0 click to see details on this item + (0.035405) trnaasnName: tRNA(Asn) Formula: ROH Charge: 0 click to see details on this item + (0.064946) trnaaspName: tRNA(Asp) Formula: ROH Charge: 0 click to see details on this item + (0.008665) trnacysName: tRNA(Cys) Formula: ROH Charge: 0 click to see details on this item + (0.067386) trnagluName: tRNA (Glu) Formula: ROH Charge: 0 click to see details on this item + (0.037694) trnaglnName: tRNA(Gln) Formula: ROH Charge: 0 click to see details on this item + (0.094618) trnaglyName: tRNA(Gly) Formula: ROH Charge: 0 click to see details on this item + (0.01782) trnahisName: tRNA(His) Formula: ROH Charge: 0 click to see details on this item + (0.053231) trnaileName: tRNA(Ile) Formula: ROH Charge: 0 click to see details on this item + (0.082051) trnaleuName: tRNA(Leu) Formula: ROH Charge: 0 click to see details on this item + (0.071622) trnalysName: tRNA(Lys) Formula: ROH Charge: 0 click to see details on this item + (0.020458) trnametName: tRNA(Met) Formula: ROH Charge: 0 click to see details on this item + (0.035592) trnapheName: tRNA(Phe) Formula: ROH Charge: 0 click to see details on this item + (0.043238) trnaproName: tRNA(Pro) Formula: ROH Charge: 0 click to see details on this item + (0.045815) trnaserName: tRNA(Ser) Formula: ROH Charge: 0 click to see details on this item + (0.049868) trnathrName: tRNA(Thr) Formula: ROH Charge: 0 click to see details on this item + (0.008944) trnatrpName: tRNA(Trp) Formula: ROH Charge: 0 click to see details on this item + (0.026832) trnatyrName: tRNA(Tyr) Formula: ROH Charge: 0 click to see details on this item + (0.075105) trnavalName: tRNA(Val) Formula: ROH Charge: 0 click to see details on this item	Not applicable	Biomass assembly
BIO0002Name: Protein synthesis (cytoplasmic) Type: Biomass Location: Cytosol KEGG ID: NA click to see details on this item	Not applicable	[c] : (2.0) gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item + (0.324) atpName: ATP Formula: C10H12N5O13P3 Charge: -4 click to see details on this item + (2.324) h2oName: H2O Formula: H2O Charge: 0 click to see details on this item + (0.12769) alatrnaName: L-Alanyl-tRNA(Ala) Formula: C3H7NO2R Charge: 1 click to see details on this item + (0.042387) argtrnaName: L-Arginyl-tRNA(Arg) Formula: C6H15N4O2R Charge: 2 click to see details on this item + (0.025739) asntrnaName: L-Asparaginyl-tRNA(Asn) Formula: C4H8N2O3R Charge: 1 click to see details on this item + (0.084822) asptrnaName: L-Aspartyl-tRNA(Asp) Formula: C4H6NO4R Charge: 0 click to see details on this item + (0.000208) cystrnaName: L-Cysteinyl-tRNA(Cys) Formula: C3H7NO2SR Charge: 1 click to see details on this item + (0.085568) glutrnaName: L-Glutamyl-tRNA(Glu) Formula: C5H8NO4R Charge: 0 click to see details on this item + (0.026184) glntrnaName: L-Glutaminyl-tRNA(Gln) Formula: C5H10N2O3R Charge: 1 click to see details on this item + (0.074691) glytrnaName: Glycyl-tRNA(Gly) Formula: C2H5NO2R Charge: 1 click to see details on this item + (0.017927) histrnaName: L-Histidyl-tRNA(His) Formula: C6H9N3O2R Charge: 1 click to see details on this item + (0.052143) iletrnaName: L-Isoleucyl-tRNA(Ile) Formula: C6H13NO2R Charge: 1 click to see details on this item + (0.079867) leutrnaName: L-Leucyl-tRNA(Leu) Formula: C6H13NO2R Charge: 1 click to see details on this item + (0.079083) lystrnaName: L-Lysine-tRNA (Lys) Formula: C6H15N2O2R Charge: 2 click to see details on this item + (0.012181) mettrnaName: L-Methionyl-tRNA (Met) Formula: C5H11NO2SR Charge: 1 click to see details on this item + (0.036544) phetrnaName: L-Phenylalanyl-tRNA(Phe) Formula: C9H11NO2R Charge: 1 click to see details on this item + (0.045145) protrnaName: L-Prolyl-tRNA(Pro) Formula: C5H9NO2R Charge: 1 click to see details on this item + (0.051284) sertrnaName: L-Seryl-tRNA(Ser) Formula: C3H7NO3R Charge: 1 click to see details on this item + (0.052305) thrtrnaName: L-Threonyl-tRNA(Thr) Formula: C4H9NO3R Charge: 1 click to see details on this item + (0.007259) trptrnaName: L-Tryptophanyl-tRNA(Trp) Formula: C11H12N2O2R Charge: 1 click to see details on this item + (0.027882) tyrtrnaName: L-Tyrosyl-tRNA(Tyr) Formula: C9H11NO3R Charge: 1 click to see details on this item + (0.071091) valtrnaName: L-Valyl-tRNA(Val) Formula: C5H11NO2R Charge: 1 click to see details on this item		prot_otherName: Non-mitochondrial protein Formula: X Charge: 0 click to see details on this item + (2.0) gdpName: GDP Formula: C10H12N5O11P2 Charge: -3 click to see details on this item + (0.324) adpName: ADP Formula: C10H12N5O10P2 Charge: -3 click to see details on this item + (3.324) hName: H+ Formula: H Charge: 1 click to see details on this item + (2.324) piName: Phosphate Formula: HO4P Charge: -2 click to see details on this item + (0.12769) trnaalaName: tRNA(Ala) Formula: ROH Charge: 0 click to see details on this item + (0.042387) trnaargName: tRNA(Arg) Formula: ROH Charge: 0 click to see details on this item + (0.025739) trnaasnName: tRNA(Asn) Formula: ROH Charge: 0 click to see details on this item + (0.084822) trnaaspName: tRNA(Asp) Formula: ROH Charge: 0 click to see details on this item + (0.000208) trnacysName: tRNA(Cys) Formula: ROH Charge: 0 click to see details on this item + (0.085568) trnagluName: tRNA (Glu) Formula: ROH Charge: 0 click to see details on this item + (0.026184) trnaglnName: tRNA(Gln) Formula: ROH Charge: 0 click to see details on this item + (0.074691) trnaglyName: tRNA(Gly) Formula: ROH Charge: 0 click to see details on this item + (0.017927) trnahisName: tRNA(His) Formula: ROH Charge: 0 click to see details on this item + (0.052143) trnaileName: tRNA(Ile) Formula: ROH Charge: 0 click to see details on this item + (0.079867) trnaleuName: tRNA(Leu) Formula: ROH Charge: 0 click to see details on this item + (0.079083) trnalysName: tRNA(Lys) Formula: ROH Charge: 0 click to see details on this item + (0.012181) trnametName: tRNA(Met) Formula: ROH Charge: 0 click to see details on this item + (0.036544) trnapheName: tRNA(Phe) Formula: ROH Charge: 0 click to see details on this item + (0.045145) trnaproName: tRNA(Pro) Formula: ROH Charge: 0 click to see details on this item + (0.051284) trnaserName: tRNA(Ser) Formula: ROH Charge: 0 click to see details on this item + (0.052305) trnathrName: tRNA(Thr) Formula: ROH Charge: 0 click to see details on this item + (0.007259) trnatrpName: tRNA(Trp) Formula: ROH Charge: 0 click to see details on this item + (0.027882) trnatyrName: tRNA(Tyr) Formula: ROH Charge: 0 click to see details on this item + (0.071091) trnavalName: tRNA(Val) Formula: ROH Charge: 0 click to see details on this item	Not applicable	Biomass assembly
BIO0003Name: RNA synthesis Type: Biomass Location: Cytosol KEGG ID: R00444;R00435 click to see details on this item	2.7.7.19Name: polynucleotide adenylyltransferase Other names: NTP polymerase, RNA adenylating enzyme, AMP polynucleotidylexotransferase, ATP-polynucleotide adenylyltransferase, ATP:polynucleotidylexotransferase, poly(A) polymerase, poly(A) synthetase, polyadenylate nucleotidyltransferase, polyadenylate polymerase, polyadenylate synthetase, polyadenylic acid polymerase, polyadenylic polymerase, terminal riboadenylate transferase, poly(A) hydrolase, RNA formation factors, PF1, adenosine triphosphate:ribonucleic acid adenylyltransferase click to see details on this item 2.7.7.6Name: DNA-directed RNA polymerase Other names: RNA polymerase, RNA nucleotidyltransferase (DNA-directed), RNA polymerase I, RNA polymerase II, RNA polymerase III, C RNA formation factors, deoxyribonucleic acid-dependent ribonucleic acid polymerase, DNA-dependent ribonucleate nucleotidyltransferase, DNA-dependent RNA nucleotidyltransferase, DNA-dependent RNA polymerase, ribonucleate nucleotidyltransferase, ribonucleate polymerase, C ribonucleic acid formation factors, ribonucleic acid nucleotidyltransferase, ribonucleic acid polymerase, ribonucleic acid transcriptase, ribonucleic polymerase, ribonucleic transcriptase, RNA nucleotidyltransferase, RNA transcriptase, transcriptase, RNA nucleotidyltransferase I click to see details on this item	[c] : (0.639534) atpName: ATP Formula: C10H12N5O13P3 Charge: -4 click to see details on this item + (0.228426) ctpName: CTP Formula: C9H12N3O14P3 Charge: -4 click to see details on this item + (0.233503) gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item + (0.304569) utpName: UTP Formula: C9H11N2O15P3 Charge: -4 click to see details on this item + (0.406032) h2oName: H2O Formula: H2O Charge: 0 click to see details on this item		RNAName: RNA (biomass) Formula: X Charge: 0 click to see details on this item + ppiName: Diphosphate Formula: HO7P2 Charge: -3 click to see details on this item + (0.406032) adpName: ADP Formula: C10H12N5O10P2 Charge: -3 click to see details on this item + (0.406032) piName: Phosphate Formula: HO4P Charge: -2 click to see details on this item + (0.406032) hName: H+ Formula: H Charge: 1 click to see details on this item	[(F43G6.5 \| T15H9.6 \| pap-1) & gld-2 & gld-4] & (rpoa-1 & rpoa-2 & ama-1 & rpb-2 & rpc-1 & rpc-2 & rpom-1 & rpb-3 & rpb-4 & rpb-5 & rpb-6 & rpb-7 & rpb-8 & rpb-9 & rpb-10 & rpb-11 & rpc-11 & rpoa-12 & rpb-12 & rpac-19 & rpac-40 & rpc-25 & let-611 & Y47G6A.9 & W09C3.4 & F26E4.4 & W06E11.1)	Biomass assembly
DMN0073Name: Selenoprotein synthesis (single aminoacid) Type: Demand Location: Cytosol KEGG ID: NA click to see details on this item	Not applicable	[c] : (2.0) gtpName: GTP Formula: C10H12N5O14P3 Charge: -4 click to see details on this item + (0.324) atpName: ATP Formula: C10H12N5O13P3 Charge: -4 click to see details on this item + (2.324) h2oName: H2O Formula: H2O Charge: 0 click to see details on this item + sectrnaName: L-Selenocysteinyl-tRNA(Sec) Formula: C3H7NO2SeR Charge: 1 click to see details on this item		(2.0) gdpName: GDP Formula: C10H12N5O11P2 Charge: -3 click to see details on this item + (0.324) adpName: ADP Formula: C10H12N5O10P2 Charge: -3 click to see details on this item + (3.324) hName: H+ Formula: H Charge: 1 click to see details on this item + (2.324) piName: Phosphate Formula: HO4P Charge: -2 click to see details on this item + trnasecName: tRNA(Sec) Formula: ROH Charge: 0 click to see details on this item	trxr-1	Demand reactions

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