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Network Biomass WormPaths
PEAPathway Enrichment Analysis
WormClustClustering- and enrichment-based association of genes with the metabolic network WPSWorm Perturb-Seq portal
Walhout Lab web page:
 walhoutlab.umassmed.edu
Email for WormFlux:
 lutfu.yilmaz@umassmed.edu
WormFlux News
February 26, 2025
 Our new Worm Perturb-Seq portal (WPS) is now publically available. For related publications, please see Zhang et al. (2025a), Zhang et al. (2025b), and Li et al. (2025).

January 1, 2025
 FBA tool is no longer supported on WormFlux websites. However, you can still perform FBA using the iCEL models through our Git repositories and downloadable model files. If you would like temporary access to the web-based FBA application, please contact us at: lutfussafak.yilmaz@umassmed.edu

September 28, 2023
 WormFlux moved to the cloud!
All functionality of the website is preserved except for FBA. Please use the old link to use this tool in the old server for a limited time. We will let you know if and when FBA tool becomes active here.
Mar 21, 2023
 WormClust and related work on the transcriptional regulation of C. elegans metabolism is published in Molecular Systems Biology!

Feb 27, 2023
 Our new tool WormClust is now available! Use WormClust to obtain metabolic clusters or pathways that best match a query gene based on gene expression profiles. See more here.
April 8, 2021
 Check out our new Pathway Enrichment Analysis tool (PEA)!
December 23, 2020
 WormPaths is published in bioRxiv.
December 21, 2020
 Our new metabolic pathway visualization tool for C. elegans, WormPaths , is ready to explore. It consists of 66 hand-drawn pathway maps!
October 6, 2020
 Our study on tissue relevant metabolism in C. elegans is published online.

March 13, 2020
 Metabolic network model in WormFlux is updated and named iCEL1314! The former model (iCEL1273) is still available here .

June 9, 2017
 WormFlux will be introduced in the C. elegans Metabolomics and Metabolic Networks Workshop on June 23 at the Worm meeting.
May 25, 2016
 iCEL1273 is published in Cell Systems. Click to reach.
May 24, 2016
 The search engine of WormFlux is updated. Partial hits are shown and wild characters are allowed.
May 19, 2016
 iCEL1273 appears online in Cell Systems.
May 19, 2016
 The first official version of WormFlux web site is launched.
February 15, 2016
 Beta version of WormFlux web site is launched for a test ride.
November 15, 2015
 Our current model, iCEL1273, is developed and finalized with 1273 genes, 1985 reactions, 623 enzymes, and 887 unique compounds.
Metabolic Network Modeling of C. elegans

The current metabolic network model is iCEL1314. You can:


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