Network Biomass WormPaths

FBAFlux Balance Analysis PEAPathway Enrichment Analysis

WormClustClustering- and enrichment-based association of genes with the metabolic network

Metabolite Overview

Abbreviation .....................................................	:	glc-D
Name .....................................................	:	D-Glucose, etc.Grape sugar, Dextrose, Glucose, D-Glucopyranose
Model ID .....................................................	:	C00031
KEGG ID (?) Compounds in KEGG database that match this compound. .....................................................	:	C00031
Formula .....................................................	:	C6H12O6
Charge .....................................................	:	0
Localization .....................................................	:	Cytosol, Extracellular
BiGG matches (?) Compounds in BiGG database that match this compound. .....................................................	:	glc-D
Other associations .....................................................	:	See reaction table below (22 reactions in total)
In WormPaths (?) Pathway maps where this metabolite is represented are listed here. Letters after map name indicate the compartments the metabolite is placed in the map: (c) Cytosol (m) Mitochondria (e) Extracellular space .....................................................	:	Represented in 6 maps... Fructose and mannose metabolism (c) Galactose metabolism (c,e) Glycolysis / gluconeogenesis (c,e) N-Glycan biosynthesis (c,e) Sphingolipid metabolism (c) Starch and sucrose metabolism (c,e)   Go to map

iCEL1314

Reactions

ID

Enzyme

Reactants

Products

Genes (?) Multiple genes are separated by OR (I) or AND (&). I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme). & indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme). If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.

Pathway

RCC0137Name: D-Glucose to alpha D-Glucose Type: Regular Location: Cytosol KEGG ID: NA click to see details on this item	Not applicable	[c] : glc-DName: D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item		glc-D-AName: alpha-D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item	Not applicable	Starch and sucrose metabolism
RCC0138Name: D-Glucose to beta D-Glucose Type: Regular Location: Cytosol KEGG ID: NA click to see details on this item	Not applicable	[c] : glc-DName: D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item		glc-D-BName: beta-D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item	Not applicable	Fructose and mannose metabolism
RC01787Name: D-sorbitol reductase Type: Regular Location: Cytosol KEGG ID: R01787 click to see details on this item	1.1.1.21Name: aldehyde reductase Other names: aldose reductase, polyol dehydrogenase (NADP+), ALR2, alditol:NADP+ oxidoreductase, alditol:NADP+ 1-oxidoreductase, NADPH-aldopentose reductase, NADPH-aldose reductase click to see details on this item	[c] : glc-DName: D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item + nadphName: Nicotinamide adenine dinucleotide phosphate - reduced Formula: C21H26N7O17P3 Charge: -4 click to see details on this item		nadpName: Nicotinamide adenine dinucleotide phosphate Formula: C21H25N7O17P3 Charge: -3 click to see details on this item + sbt-DName: D-Sorbitol Formula: C6H14O6 Charge: 0 click to see details on this item	Y39G8B.1	Fructose and mannose metabolism
RC00801Name: sucrose glucohydrolase Type: Regular Location: Cytosol KEGG ID: R00801 click to see details on this item	3.2.1.20Name: alpha-glucosidase Other names: maltase, glucoinvertase, glucosidosucrase, maltase-glucoamylase, alpha-glucopyranosidase, glucosidoinvertase, alpha-D-glucosidase, alpha-glucoside hydrolase, alpha-1,4-glucosidase click to see details on this item	[c] : h2oName: H2O Formula: H2O Charge: 0 click to see details on this item + sucrName: Sucrose Formula: C12H22O11 Charge: 0 click to see details on this item		fruName: D-Fructose Formula: C6H12O6 Charge: 0 click to see details on this item + glc-DName: D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item	aagr-1 | aagr-2	Galactose metabolism
RC01100Name: Lactose galactohydrolase Type: Regular Location: Cytosol KEGG ID: R01100 click to see details on this item	3.2.1.23Name: beta-galactosidase Other names: lactase (ambiguous), beta-lactosidase, maxilact, hydrolact, beta-D-lactosidase, S 2107, lactozym, trilactase, beta-D-galactanase, oryzatym, sumiklat click to see details on this item	[c] : h2oName: H2O Formula: H2O Charge: 0 click to see details on this item + lctsName: Lactose Formula: C12H22O11 Charge: 0 click to see details on this item		galName: D-Galactose Formula: C6H12O6 Charge: 0 click to see details on this item + glc-DName: D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item	bgal-1	Galactose metabolism
RC01101Name: melibiose galactohydrolase Type: Regular Location: Cytosol KEGG ID: R01101 click to see details on this item	3.2.1.22Name: alpha-galactosidase Other names: melibiase, alpha-D-galactosidase, alpha-galactosidase A, alpha-galactoside galactohydrolase click to see details on this item	[c] : melibName: Melibiose Formula: C12H22O11 Charge: 0 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item		galName: D-Galactose Formula: C6H12O6 Charge: 0 click to see details on this item + glc-DName: D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item	gana-1	Galactose metabolism
RC01600Name: ATP:beta-D-glucose 6-phosphotransferase Type: Regular Location: Cytosol KEGG ID: R01600 click to see details on this item	2.7.1.1Name: hexokinase Other names: hexokinase type IV glucokinase, hexokinase D, hexokinase type IV, hexokinase (phosphorylating), ATP-dependent hexokinase, glucose ATP phosphotransferase click to see details on this item	[c] : atpName: ATP Formula: C10H12N5O13P3 Charge: -4 click to see details on this item + glc-D-BName: beta-D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item		adpName: ADP Formula: C10H12N5O10P2 Charge: -3 click to see details on this item + g6p-BName: beta-D-glucose 6-phosphate Formula: C6H11O9P Charge: -2 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item	hxk-1 | hxk-2 | hxk-3	Amino sugar and nucleotide sugar metabolism
RC01786Name: ATP:alpha-D-glucose 6-phosphotransferase Type: Regular Location: Cytosol KEGG ID: R01786 click to see details on this item	2.7.1.1Name: hexokinase Other names: hexokinase type IV glucokinase, hexokinase D, hexokinase type IV, hexokinase (phosphorylating), ATP-dependent hexokinase, glucose ATP phosphotransferase click to see details on this item	[c] : atpName: ATP Formula: C10H12N5O13P3 Charge: -4 click to see details on this item + glc-D-AName: alpha-D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item		adpName: ADP Formula: C10H12N5O10P2 Charge: -3 click to see details on this item + g6p-AName: alpha-D-Glucose 6-phosphate Formula: C6H11O9P Charge: -2 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item	hxk-1 | hxk-2 | hxk-3	Amino sugar and nucleotide sugar metabolism
RC09085Name: ADP:alpha-D-glucose 6-phosphotransferase Type: Regular Location: Cytosol KEGG ID: R09085 click to see details on this item	2.7.1.147Name: ADP-specific glucokinase Other names: ADP-dependent glucokinase click to see details on this item	[c] : glc-D-AName: alpha-D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item + adpName: ADP Formula: C10H12N5O10P2 Charge: -3 click to see details on this item		g6p-AName: alpha-D-Glucose 6-phosphate Formula: C6H11O9P Charge: -2 click to see details on this item + ampName: AMP Formula: C10H12N5O7P Charge: -2 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item	C50D2.7	Amino sugar and nucleotide sugar metabolism
RC09086Name: ADP:beta-D-glucose 6-phosphotransferase Type: Regular Location: Cytosol KEGG ID: R09086 click to see details on this item	2.7.1.147Name: ADP-specific glucokinase Other names: ADP-dependent glucokinase click to see details on this item	[c] : glc-D-BName: beta-D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item + adpName: ADP Formula: C10H12N5O10P2 Charge: -3 click to see details on this item		g6p-BName: beta-D-glucose 6-phosphate Formula: C6H11O9P Charge: -2 click to see details on this item + ampName: AMP Formula: C10H12N5O7P Charge: -2 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item	C50D2.7	Amino sugar and nucleotide sugar metabolism
RC01602Name: D-Glucose 1-epimerase Type: Regular Location: Cytosol KEGG ID: R01602 click to see details on this item	5.1.3.3Name: aldose 1-epimerase Other names: mutarotase, aldose mutarotase, galactose mutarotase, galactose 1-epimerase, D-galactose 1-epimerase click to see details on this item	[c] : glc-D-AName: alpha-D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item		glc-D-BName: beta-D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item	C01B4.6 | Y19D10A.16	Glycolysis / gluconeogenesis
RC05979Name: mannosyl-oligosaccharide glucosidase Type: Regular Location: Cytosol KEGG ID: R05979 click to see details on this item	3.2.1.106Name: mannosyl-oligosaccharide glucosidase Other names: Glc3Man9NAc2 oligosaccharide glucosidase, trimming glucosidase I click to see details on this item	[c] : g3m8masnName: (alpha-D-Glucosyl)3-(alpha-D-mannosyl)8-beta-D-mannosyl-diacetylchitobiosyl-L-asparagine (protein) Formula: C88H147N2O70X Charge: 0 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item		g2m8masnName: (alpha-D-Glucosyl)2-(alpha-D-mannosyl)8-beta-D-mannosyl-diacetylchitobiosyl-L-asparagine (protein) Formula: C82H137N2O65X Charge: 0 click to see details on this item + glc-DName: D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item	mogs-1	N-Glycan biosynthesis
RC05980Name: glucan 1,3-alpha-glucosidase (acting on g2m8masn) Type: Regular Location: Cytosol KEGG ID: R05980 click to see details on this item	3.2.1.84Name: glucan 1,3-alpha-glucosidase Other names: exo-1,3-alpha-glucanase, glucosidase II, 1,3-alpha-D-glucan 3-glucohydrolase click to see details on this item	[c] : g2m8masnName: (alpha-D-Glucosyl)2-(alpha-D-mannosyl)8-beta-D-mannosyl-diacetylchitobiosyl-L-asparagine (protein) Formula: C82H137N2O65X Charge: 0 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item		g1m8masnName: (alpha-D-Glucosyl)-(alpha-D-mannosyl)8-beta-D-mannosyl-diacetylchitobiosyl-L-asparagine (protein) Formula: C76H127N2O60X Charge: 0 click to see details on this item + glc-DName: D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item	aagr-3 | aagr-4	N-Glycan biosynthesis
RC05981Name: glucan 1,3-alpha-glucosidase (acting on g1m8masn) Type: Regular Location: Cytosol KEGG ID: R05981 click to see details on this item	3.2.1.84Name: glucan 1,3-alpha-glucosidase Other names: exo-1,3-alpha-glucanase, glucosidase II, 1,3-alpha-D-glucan 3-glucohydrolase click to see details on this item	[c] : g1m8masnName: (alpha-D-Glucosyl)-(alpha-D-mannosyl)8-beta-D-mannosyl-diacetylchitobiosyl-L-asparagine (protein) Formula: C76H127N2O60X Charge: 0 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item		glc-DName: D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item + m8masnName: (alpha-D-mannosyl)8-beta-D-mannosyl-diacetylchitobiosyl-L-asparagine (protein) Formula: C70H117N2O55X Charge: 0 click to see details on this item	aagr-3 | aagr-4	N-Glycan biosynthesis
RC01498Name: D-Glucosyl-N-acylsphingosine glucohydrolase Type: Regular Location: Cytosol KEGG ID: R01498 click to see details on this item	3.2.1.45Name: glucosylceramidase Other names: psychosine hydrolase, glucosphingosine glucosylhydrolase, GlcCer-beta-glucosidase, beta-D-glucocerebrosidase, glucosylcerebrosidase, beta-glucosylceramidase, ceramide glucosidase, glucocerebrosidase, glucosylsphingosine beta-glucosidase, glucosylsphingosine beta-D-glucosidase click to see details on this item	[c] : gluside_ceName: glucocerebroside Formula: C25H48NO7FULLRCO Charge: 0 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item		crm_ceName: ceramide Formula: C19H38NO2FULLRCO Charge: 0 click to see details on this item + glc-DName: D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item	(R08F11.1 | hpo-13) | (gba-1 | gba-2 | gba-3 | gba-4)	Sphingolipid metabolism
RC00306Name: cellobiose glucohydrolase Type: Regular Location: Cytosol KEGG ID: R00306 click to see details on this item	3.2.1.21Name: beta-glucosidase Other names: gentiobiase, cellobiase, emulsin, elaterase, aryl-beta-glucosidase, beta-D-glucosidase, beta-glucoside glucohydrolase, arbutinase, amygdalinase, p-nitrophenyl beta-glucosidase, primeverosidase, amygdalase, linamarase, salicilinase, beta-1,6-glucosidase click to see details on this item	[c] : clbName: Cellobiose Formula: C12H22O11 Charge: 0 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item		(2) glc-DName: D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item	klo-1 | klo-2	Starch and sucrose metabolism
RCC0045Name: Dextrin 6-alpha-D-glucanohydrolase Type: Regular Location: Cytosol KEGG ID: NA click to see details on this item	3.2.1.33Name: amylo-alpha-1,6-glucosidase Other names: amylo-1,6-glucosidase, dextrin 6-alpha-D-glucosidase, amylopectin 1,6-glucosidase, dextrin-1,6-glucosidase, glycogen phosphorylase-limit dextrin alpha-1,6-glucohydrolase click to see details on this item	[c] : dxtrn2Name: Limited dextrin 2 Formula: C6H10O5 Charge: 0 click to see details on this item + (0.2) h2oName: H2O Formula: H2O Charge: 0 click to see details on this item		(0.2) glc-D-BName: beta-D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item + (0.8) dxtrn3Name: Limited dextrin 3 Formula: C6H10O5 Charge: 0 click to see details on this item	agl-1	Starch and sucrose metabolism
RC00028Name: maltose glucohydrolase Type: Regular Location: Cytosol KEGG ID: R00028 click to see details on this item	3.2.1.20Name: alpha-glucosidase Other names: maltase, glucoinvertase, glucosidosucrase, maltase-glucoamylase, alpha-glucopyranosidase, glucosidoinvertase, alpha-D-glucosidase, alpha-glucoside hydrolase, alpha-1,4-glucosidase click to see details on this item	[c] : h2oName: H2O Formula: H2O Charge: 0 click to see details on this item + maltName: Maltose Formula: C12H22O11 Charge: 0 click to see details on this item		(2) glc-D-AName: alpha-D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item	aagr-1 | aagr-2	Starch and sucrose metabolism
RC00010Name: alpha,alpha-trehalose glucohydrolase Type: Regular Location: Cytosol KEGG ID: R00010 click to see details on this item	3.2.1.28Name: alpha,alpha-trehalase Other names: trehalase click to see details on this item	[c] : h2oName: H2O Formula: H2O Charge: 0 click to see details on this item + treName: Trehalose Formula: C12H22O11 Charge: 0 click to see details on this item		(2) glc-DName: D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item	tre-1 | tre-2 | tre-3 | tre-4 | tre-5	Starch and sucrose metabolism
DGR0017Name: Bacterial outer LPS (except for the first two monomers embedded in lipa) degradation Type: Degradation Location: Cytosol KEGG ID: NA click to see details on this item	To be determined	[c] : outerlps_BACName: Outer section of lipopolysaccharide (bacteria) Formula: C61H101N2O49 Charge: -1 click to see details on this item + (10) h2oName: H2O Formula: H2O Charge: 0 click to see details on this item + (4) hName: H+ Formula: H Charge: 1 click to see details on this item + (2) nadhName: Nicotinamide adenine dinucleotide - reduced Formula: C21H27N7O14P2 Charge: -2 click to see details on this item		(9) glc-D-AName: alpha-D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item + (2) ethaName: Ethanolamine Formula: C2H8NO Charge: 1 click to see details on this item + pyrName: Pyruvate Formula: C3H3O3 Charge: -1 click to see details on this item + (2) nadName: Nicotinamide adenine dinucleotide Formula: C21H26N7O14P2 Charge: -1 click to see details on this item	Not determined	Bacterial digestion
TCE5085Name: glucose transport Type: Transport Location: Cytosol, Extracellular KEGG ID: NA click to see details on this item	Not applicable	glc-DName: D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item[c]		glc-DName: D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item[e]	fgt-1	Transport
EX00031Name: D-Glucose exchange Type: Exchange Location: Extracellular KEGG ID: NA click to see details on this item	Not applicable	glc-DName: D-Glucose Formula: C6H12O6 Charge: 0 click to see details on this item[e]			Not applicable	Exchange with the environment

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