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Network Biomass WormPaths
FBAFlux Balance Analysis PEAPathway Enrichment Analysis
WormClustClustering- and enrichment-based association of genes with the metabolic network
Metabolite Overview
Abbreviation ..................................................... : ak2lgchol
Name ..................................................... : 1-Alkyl-2-lyso-sn-glycero-3-phosphocholine, etc.1-Organyl-2-lyso-sn-glycero-3-phosphocholine, 1-Radyl-2-lyso-sn-glycero-3-phosphocholine, 1-Alkyl-sn-glycero-3-phosphocholine
Model ID ..................................................... : C04317
KEGG ID (?) Compounds in KEGG database that match this compound. ..................................................... : C04317
Formula ..................................................... : C8H19NO6PRC2H4
Charge ..................................................... : 0
Localization ..................................................... : Cytosol, Extracellular
BiGG matches (?) Compounds in BiGG database that match this compound. ..................................................... : ak2lgchol_hs
Other associations ..................................................... : See reaction table below (6 reactions in total)

In WormPaths (?) Pathway maps where this metabolite is represented are listed here.

Letters after map name indicate the compartments the metabolite is placed in the map:

(c) Cytosol
(m) Mitochondria
(e) Extracellular space ..................................................... 		: Ether lipid metabolism (c)
Comments
  • Charge based on human version in BiGG.

    • Reactions
    ID Enzyme Reactants Products Genes (?) Multiple genes are separated by OR (I) or AND (&).

    I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
    & indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

    If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.     		Pathway
    RCC0140Name: glyceryl-ether monoxygenase
    Type: Regular
    Location: Cytosol
    KEGG ID: R04044

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    1.14.16.5Name: alkylglycerol monooxygenase
    Other names: glyceryl-ether monooxygenase, glyceryl-ether cleaving enzyme, glyceryl ether oxygenase, glyceryl etherase, O-alkylglycerol monooxygenase

    click to see details on this item
    [c] : ak2lgcholName: 1-Alkyl-2-lyso-sn-glycero-3-phosphocholine
    Formula: C8H19NO6PRC2H4
    Charge: 0




    click to see details on this item     + thbptName: Tetrahydrobiopterin
    Formula: C9H15N5O3
    Charge: 0




    click to see details on this item     + o2Name: O2
    Formula: O2
    Charge: 0




    click to see details on this item
    hak2lgcholName: 1-hydroxyalkyl-2-lyso-sn-glycero-3-phosphocholine
    Formula: C8H19NO6PRC2H4O
    Charge: 0




    click to see details on this item     + dhbptName: "6,7-Dihydrobiopterin"
    Formula: C9H13N5O3
    Charge: 0




    click to see details on this item     + h2oName: H2O
    Formula: H2O
    Charge: 0




    click to see details on this item
    agmo-1
    Ether lipid metabolism
    RC04452Name: Platelet-activating factor acetylhydrolase
    Type: Regular
    Location: Cytosol
    KEGG ID: R04452

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    3.1.1.47Name: 1-alkyl-2-acetylglycerophosphocholine esterase
    Other names: 1-alkyl-2-acetyl-sn-glycero-3-phosphocholine acetylhydrolase, alkylacetyl-GPC:acetylhydrolase

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    [c] : pafName: Platelet-activating factor
    Formula: C10H21NO7PRC2H4
    Charge: 0




    click to see details on this item     + h2oName: H2O
    Formula: H2O
    Charge: 0




    click to see details on this item
    ak2lgcholName: 1-Alkyl-2-lyso-sn-glycero-3-phosphocholine
    Formula: C8H19NO6PRC2H4
    Charge: 0




    click to see details on this item     + acName: Acetate
    Formula: C2H3O2
    Charge: -1




    click to see details on this item     + hName: H+
    Formula: H
    Charge: 1




    click to see details on this item
    [(paf-1 | paf-2) | C27A7.5] | lis-1
    Ether lipid metabolism
    RC07387Name: Plasmanylcholine 2-acylhydrolase
    Type: Regular
    Location: Cytosol
    KEGG ID: R07387

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    3.1.1.4Name: phospholipase A2
    Other names: lecithinase A, phosphatidase, phosphatidolipase, phospholipase A

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    [c] : akac2gcholName: 1-alkyl 2-acylglycerol 3-phosphocholine
    Formula: C9H18NO7PRRC2H4
    Charge: 0




    click to see details on this item     + h2oName: H2O
    Formula: H2O
    Charge: 0




    click to see details on this item
    ak2lgcholName: 1-Alkyl-2-lyso-sn-glycero-3-phosphocholine
    Formula: C8H19NO6PRC2H4
    Charge: 0




    click to see details on this item     + Rtotal6Name: R total 6
    Formula: CO2R
    Charge: -1




    click to see details on this item     + hName: H+
    Formula: H
    Charge: 1




    click to see details on this item
    ipla-1 | ipla-2 | ipla-3 | ipla-4 | ipla-5 | ipla-6 | ipla-7 | C07E3.9 | Y69A2AL.2
    Ether lipid metabolism
    TCE5387Name: 1-Alkyl-2-lyso-sn-glycero-3-phosphocholine secretion
    Type: Transport
    Location: Cytosol, Extracellular
    KEGG ID: NA

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    Not applicable
    ak2lgcholName: 1-Alkyl-2-lyso-sn-glycero-3-phosphocholine
    Formula: C8H19NO6PRC2H4
    Charge: 0




    click to see details on this item    [c] + atpName: ATP
    Formula: C10H12N5O13P3
    Charge: -4




    click to see details on this item    [c] + h2oName: H2O
    Formula: H2O
    Charge: 0




    click to see details on this item    [c]
    adpName: ADP
    Formula: C10H12N5O10P2
    Charge: -3




    click to see details on this item    [c] + ak2lgcholName: 1-Alkyl-2-lyso-sn-glycero-3-phosphocholine
    Formula: C8H19NO6PRC2H4
    Charge: 0




    click to see details on this item    [e] + hName: H+
    Formula: H
    Charge: 1




    click to see details on this item    [c] + piName: Phosphate
    Formula: HO4P
    Charge: -2




    click to see details on this item    [c]
    Not determined
    Transport
    TCE5388Name: 1-Alkyl-2-lyso-sn-glycero-3-phosphocholine uptake
    Type: Transport
    Location: Cytosol, Extracellular
    KEGG ID: NA

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    Not applicable
    ak2lgcholName: 1-Alkyl-2-lyso-sn-glycero-3-phosphocholine
    Formula: C8H19NO6PRC2H4
    Charge: 0




    click to see details on this item    [e]
    ak2lgcholName: 1-Alkyl-2-lyso-sn-glycero-3-phosphocholine
    Formula: C8H19NO6PRC2H4
    Charge: 0




    click to see details on this item    [c]
    Not determined
    Transport
    EX04317Name: 1-Alkyl-2-lyso-sn-glycero-3-phosphocholine exchange
    Type: Exchange
    Location: Extracellular
    KEGG ID: NA

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    Not applicable
    ak2lgcholName: 1-Alkyl-2-lyso-sn-glycero-3-phosphocholine
    Formula: C8H19NO6PRC2H4
    Charge: 0




    click to see details on this item    [e]
    Not applicable
    Exchange with the environment
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