Network Biomass WormPaths

FBAFlux Balance Analysis PEAPathway Enrichment Analysis

WormClustClustering- and enrichment-based association of genes with the metabolic network

Metabolite Overview

Abbreviation .....................................................	:	fgam
Name .....................................................	:	N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide, etc.5'-Phosphoribosyl-N-formylglycinamide, N-Formyl-GAR, N-Formylglycinamide ribonucleotide
Model ID .....................................................	:	C04376
KEGG ID (?) Compounds in KEGG database that match this compound. .....................................................	:	C04376
Formula .....................................................	:	C8H13N2O9P
Charge .....................................................	:	-2
Localization .....................................................	:	Cytosol
BiGG matches (?) Compounds in BiGG database that match this compound. .....................................................	:	fgam
Other associations .....................................................	:	See reaction table below.
In WormPaths (?) Pathway maps where this metabolite is represented are listed here. Letters after map name indicate the compartments the metabolite is placed in the map: (c) Cytosol (m) Mitochondria (e) Extracellular space .....................................................	:	Folate cycle (c), Purine metabolism (c)

iCEL1314

Reactions

ID

Enzyme

Reactants

Products

Genes (?) Multiple genes are separated by OR (I) or AND (&). I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme). & indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme). If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.

Pathway

RC04326Name: 5'-Phosphoribosyl-N-formylglycinamide formation by 5,10-Methenyltetrahydrofolate Type: Regular Location: Cytosol KEGG ID: R04326 click to see details on this item	2.1.2.2Name: phosphoribosylglycinamide formyltransferase Other names: 2-amino-N-ribosylacetamide 5'-phosphate transformylase, GAR formyltransferase, GAR transformylase, glycinamide ribonucleotide transformylase, GAR TFase, 5,10-methenyltetrahydrofolate:2-amino-N-ribosylacetamide ribonucleotide transformylase click to see details on this item	[c] : garName: N1-(5-Phospho-D-ribosyl)glycinamide Formula: C7H14N2O8P Charge: -1 click to see details on this item + methfName: "5,10-Methenyltetrahydrofolate" Formula: C20H20N7O6 Charge: -1 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item		fgamName: N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide Formula: C8H13N2O9P Charge: -2 click to see details on this item + thfName: "5,6,7,8-Tetrahydrofolate" Formula: C19H21N7O6 Charge: -2 click to see details on this item + (2) hName: H+ Formula: H Charge: 1 click to see details on this item	F38B6.4	Folate cycle
RC04325Name: 10-Formyltetrahydrofolate:5-phosphoribosylglycinamide formyltransferase Type: Regular Location: Cytosol KEGG ID: R04325 click to see details on this item	2.1.2.2Name: phosphoribosylglycinamide formyltransferase Other names: 2-amino-N-ribosylacetamide 5'-phosphate transformylase, GAR formyltransferase, GAR transformylase, glycinamide ribonucleotide transformylase, GAR TFase, 5,10-methenyltetrahydrofolate:2-amino-N-ribosylacetamide ribonucleotide transformylase click to see details on this item	[c] : 10fthfName: 10-Formyltetrahydrofolate Formula: C20H21N7O7 Charge: -2 click to see details on this item + garName: N1-(5-Phospho-D-ribosyl)glycinamide Formula: C7H14N2O8P Charge: -1 click to see details on this item		fgamName: N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide Formula: C8H13N2O9P Charge: -2 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item + thfName: "5,6,7,8-Tetrahydrofolate" Formula: C19H21N7O6 Charge: -2 click to see details on this item	F38B6.4	Folate cycle
RC04463Name: 5-Phosphoribosylformylglycinamide:L-glutamine amido-ligase (ADP-forming) Type: Regular Location: Cytosol KEGG ID: R04463 click to see details on this item	6.3.5.3Name: phosphoribosylformylglycinamidine synthase Other names: phosphoribosylformylglycinamidine synthetase, formylglycinamide ribonucloetide amidotransferase, phosphoribosylformylglycineamidine synthetase, FGAM synthetase, FGAR amidotransferase, 5'-phosphoribosylformylglycinamide:L-glutamine amido-ligase (ADP-forming), 2-N-formyl-1-N-(5-phospho-D-ribosyl)glycinamide:L-glutamine amido-ligase (ADP-forming) click to see details on this item	[c] : atpName: ATP Formula: C10H12N5O13P3 Charge: -4 click to see details on this item + fgamName: N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide Formula: C8H13N2O9P Charge: -2 click to see details on this item + gln-LName: L-Glutamine Formula: C5H10N2O3 Charge: 0 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item		adpName: ADP Formula: C10H12N5O10P2 Charge: -3 click to see details on this item + fpramName: 2-(Formamido)-N1-(5-phospho-D-ribosyl)acetamidine Formula: C8H15N3O8P Charge: -1 click to see details on this item + glu-LName: L-Glutamate Formula: C5H8NO4 Charge: -1 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item + piName: Phosphate Formula: HO4P Charge: -2 click to see details on this item	F10F2.2	Purine metabolism

The information and tools provided in this website are to be used for academic purposes only.