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Use wild characters " ? " and " * " for efficient search:
  • ? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
  • * : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.
Network Biomass WormPaths
FBAFlux Balance Analysis PEAPathway Enrichment Analysis
WormClustClustering- and enrichment-based association of genes with the metabolic network
Metabolite Overview
Abbreviation ..................................................... : chol
Name ..................................................... : Choline, etc.Bilineurine
Model ID ..................................................... : C00114
KEGG ID (?) Compounds in KEGG database that match this compound. ..................................................... : C00114
Formula ..................................................... : C5H14NO
Charge ..................................................... : +1
Localization ..................................................... : Mitochondria, Cytosol, Extracellular
BiGG matches (?) Compounds in BiGG database that match this compound. ..................................................... : chol
Other associations ..................................................... : See reaction table below (10 reactions in total)

In WormPaths (?) Pathway maps where this metabolite is represented are listed here.

Letters after map name indicate the compartments the metabolite is placed in the map:

(c) Cytosol
(m) Mitochondria
(e) Extracellular space ..................................................... 		: Glycerophospholipid metabolism (c,m), Serine metabolism (c,m)
Comments
ERROR
Reactions
ID Enzyme Reactants Products Genes (?) Multiple genes are separated by OR (I) or AND (&).

I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
& indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses. 		Pathway
RC01310Name: Phosphatidylcholine phosphatidohydrolase
Type: Regular
Location: Cytosol
KEGG ID: R01310

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3.1.4.4Name: phospholipase D
Other names: lipophosphodiesterase II, lecithinase D, choline phosphatase

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[c] : h2oName: H2O
Formula: H2O
Charge: 0




click to see details on this item + pcholName: Phosphatidylcholine
Formula: C8H18NO4PFULLRCO2FULLR2CO2
Charge: 0




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cholName: Choline
Formula: C5H14NO
Charge: 1




click to see details on this item + hName: H+
Formula: H
Charge: 1




click to see details on this item + pa_plName: Phosphatidic acid (phospholipids)
Formula: C3H5O4PFULLRCO2FULLR2CO2
Charge: -2




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pld-1 | (F09G2.8 | T05C3.6 | Y51A2D.13)
Glycerophospholipid metabolism
RC01030Name: sn-Glycero-3-phosphocholine glycerophosphohydrolase
Type: Regular
Location: Cytosol
KEGG ID: R01030

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3.1.4.46Name: glycerophosphodiester phosphodiesterase
Other names: gene hpd protein, glycerophosphoryl diester phosphodiesterase, IgD-binding protein D

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[c] : g3pcName: sn-Glycero-3-phosphocholine
Formula: C8H20NO6P
Charge: 0




click to see details on this item + h2oName: H2O
Formula: H2O
Charge: 0




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cholName: Choline
Formula: C5H14NO
Charge: 1




click to see details on this item + glyc3pName: Glycerol 3-phosphate
Formula: C3H7O6P
Charge: -2




click to see details on this item + hName: H+
Formula: H
Charge: 1




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T12B3.3 | T22G5.1 | ZC155.4
Glycerophospholipid metabolism
RC01023Name: Acetyl-CoA:choline O-acetyltransferase
Type: Regular
Location: Cytosol
KEGG ID: R01023

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2.3.1.6Name: choline O-acetyltransferase
Other names: choline acetylase, choline acetyltransferase

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[c] : accoaName: Acetyl-CoA
Formula: C23H34N7O17P3S
Charge: -4




click to see details on this item + cholName: Choline
Formula: C5H14NO
Charge: 1




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achName: Acetylcholine
Formula: C7H16NO2
Charge: 1




click to see details on this item + coaName: Coenzyme A
Formula: C21H32N7O16P3S
Charge: -4




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cha-1
Glycerophospholipid metabolism
RC01026Name: Acetylcholine aectylhydrolase
Type: Regular
Location: Cytosol
KEGG ID: R01026

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3.1.1.7Name: acetylcholinesterase
Other names: true cholinesterase, choline esterase I, cholinesterase, acetylthiocholinesterase, acetylcholine hydrolase, acetyl.beta-methylcholinesterase, AcCholE

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[c] : achName: Acetylcholine
Formula: C7H16NO2
Charge: 1




click to see details on this item + h2oName: H2O
Formula: H2O
Charge: 0




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acName: Acetate
Formula: C2H3O2
Charge: -1




click to see details on this item + cholName: Choline
Formula: C5H14NO
Charge: 1




click to see details on this item + hName: H+
Formula: H
Charge: 1




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ace-1 | ace-2 | ace-4
Glycerophospholipid metabolism
RC01021Name: ATP:choline phosphotransferase
Type: Regular
Location: Cytosol
KEGG ID: R01021

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2.7.1.32Name: choline kinase
Other names: choline kinase (phosphorylating), choline phosphokinase, choline-ethanolamine kinase

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[c] : atpName: ATP
Formula: C10H12N5O13P3
Charge: -4




click to see details on this item + cholName: Choline
Formula: C5H14NO
Charge: 1




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adpName: ADP
Formula: C10H12N5O10P2
Charge: -3




click to see details on this item + cholpName: Choline phosphate
Formula: C5H13NO4P
Charge: -1




click to see details on this item + hName: H+
Formula: H
Charge: 1




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(cka-1 | cka-2 | ckb-1 | ckb-2 | ckb-3) | ckb-4
Glycerophospholipid metabolism
RC07377Name: phosphatidylserine synthase 1
Type: Regular
Location: Cytosol
KEGG ID: R07377

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2.7.8.-Name: phosphatidylserine synthase 1
Other names: cDP-diacylglycerol:phosphatidylglycerol 3-phosphatidyltransferase

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[c] : pcholName: Phosphatidylcholine
Formula: C8H18NO4PFULLRCO2FULLR2CO2
Charge: 0




click to see details on this item + ser-LName: L-Serine
Formula: C3H7NO3
Charge: 0




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cholName: Choline
Formula: C5H14NO
Charge: 1




click to see details on this item + psName: Phosphatidylserine
Formula: C6H11NO6PFULLRCO2FULLR2CO2
Charge: -1




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pssy-1
Glycerophospholipid metabolism
RM01025Name: choline:acceptor 1-oxidoreductase
Type: Regular
Location: Mitochondria
KEGG ID: R01025

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1.1.99.1Name: choline dehydrogenase
Other names: choline oxidase, choline-cytochrome c reductase, choline:(acceptor) oxidoreductase, choline:(acceptor) 1-oxidoreductase

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[m] : cholName: Choline
Formula: C5H14NO
Charge: 1




click to see details on this item + fadName: Flavin adenine dinucleotide oxidized
Formula: C27H31N9O15P2
Charge: -2




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betaldName: Betaine aldehyde
Formula: C5H12NO
Charge: 1




click to see details on this item + fadh2Name: Flavin adenine dinucleotide reduced
Formula: C27H33N9O15P2
Charge: -2




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C34C6.4
Glycerophospholipid metabolism
TCM0196Name: Choline transport
Type: Transport
Location: Cytosol, Mitochondria
KEGG ID: NA

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Not applicable
cholName: Choline
Formula: C5H14NO
Charge: 1




click to see details on this item[c]
cholName: Choline
Formula: C5H14NO
Charge: 1




click to see details on this item[m]
Not determined
Transport
TCE0757Name: Choline transport
Type: Transport
Location: Cytosol, Extracellular
KEGG ID: NA

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Not applicable
cholName: Choline
Formula: C5H14NO
Charge: 1




click to see details on this item[e]
cholName: Choline
Formula: C5H14NO
Charge: 1




click to see details on this item[c]
Not determined
Transport
EX00114Name: Choline exchange
Type: Exchange
Location: Extracellular
KEGG ID: NA

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Not applicable
cholName: Choline
Formula: C5H14NO
Charge: 1




click to see details on this item[e]
Not applicable
Exchange with the environment
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