WormFlux: mechanistic analysis of C. elegans metabolism

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(?) Enter a search word or phrase (left box), optionally select an appropriate field (middle), and hit the search button or press enter. This search engine is NOT case sensitive.

Use wild characters " ? " and " * " for efficient search:

? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
* : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.

Network Biomass WormPaths

FBAFlux Balance Analysis PEAPathway Enrichment Analysis

WormClustClustering- and enrichment-based association of genes with the metabolic network

Enzyme Overview

Enzyme (?) Identification in Enzyme Commission (EC) numbering system. .....................................................	:	2.4.1.1
Name .....................................................	:	Glycogen phosphorylase, etc.Muscle phosphorylase a and b, Amylophosphorylase, Polyphosphorylase, Amylopectin phosphorylase, Glucan phosphorylase, Alpha-glucan phosphorylase, 1,4-alpha-glucan phosphorylase, Glucosan phosphorylase, Granulose phosphorylase, Maltodextrin phosphorylase, Muscle phosphorylase, Myophosphorylase, Potato phosphorylase, Starch phosphorylase, 1,4-alpha-D-glucan:phosphate alpha-D-glucosyltransferase, Phosphorylase (ambiguous)
KO (?) The KEGG orthology group (KO) that is associated with this enzyme. .....................................................	:	K00688E2.4.1.1 glgP PYG; starch phosphorylase [EC:2.4.1.1]
Genes .....................................................	:	T22F3.3
Localization .....................................................	:	Cytosol
Other associations .....................................................	:	See reaction table below.

External links

Reactions

ID

Enzyme

Reactants

Products

Genes (?) Multiple genes are separated by OR (I) or AND (&).

I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
& indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.

Pathway

RCC0043Name: glycogen phosphorylase Type: Regular Location: Cytosol KEGG ID: R01821 click to see details on this item	2.4.1.1Name: glycogen phosphorylase Other names: muscle phosphorylase a and b, amylophosphorylase, polyphosphorylase, amylopectin phosphorylase, glucan phosphorylase, alpha-glucan phosphorylase, 1,4-alpha-glucan phosphorylase, glucosan phosphorylase, granulose phosphorylase, maltodextrin phosphorylase, muscle phosphorylase, myophosphorylase, potato phosphorylase, starch phosphorylase, 1,4-alpha-D-glucan:phosphate alpha-D-glucosyltransferase, phosphorylase (ambiguous) click to see details on this item	[c] : glycogenName: glycogen Formula: C6H10O5 Charge: 0 click to see details on this item + (0.5) piName: Phosphate Formula: HO4P Charge: -2 click to see details on this item		(0.5) g1pName: D-Glucose 1-phosphate Formula: C6H11O9P Charge: -2 click to see details on this item + (0.5) dxtrn1Name: Limited dextrin 1 Formula: C6H10O5 Charge: 0 click to see details on this item	T22F3.3	Starch and sucrose metabolism
RCC0046Name: dextrin phosphorylase Type: Regular Location: Cytosol KEGG ID: NA click to see details on this item	2.4.1.1Name: glycogen phosphorylase Other names: muscle phosphorylase a and b, amylophosphorylase, polyphosphorylase, amylopectin phosphorylase, glucan phosphorylase, alpha-glucan phosphorylase, 1,4-alpha-glucan phosphorylase, glucosan phosphorylase, granulose phosphorylase, maltodextrin phosphorylase, muscle phosphorylase, myophosphorylase, potato phosphorylase, starch phosphorylase, 1,4-alpha-D-glucan:phosphate alpha-D-glucosyltransferase, phosphorylase (ambiguous) click to see details on this item	[c] : dxtrn3Name: Limited dextrin 3 Formula: C6H10O5 Charge: 0 click to see details on this item + piName: Phosphate Formula: HO4P Charge: -2 click to see details on this item		g1pName: D-Glucose 1-phosphate Formula: C6H11O9P Charge: -2 click to see details on this item	T22F3.3	Starch and sucrose metabolism
DGR0028Name: Bacterial glycogen degradation Type: Degradation Location: Cytosol KEGG ID: R01821 click to see details on this item	2.4.1.1Name: glycogen phosphorylase Other names: muscle phosphorylase a and b, amylophosphorylase, polyphosphorylase, amylopectin phosphorylase, glucan phosphorylase, alpha-glucan phosphorylase, 1,4-alpha-glucan phosphorylase, glucosan phosphorylase, granulose phosphorylase, maltodextrin phosphorylase, muscle phosphorylase, myophosphorylase, potato phosphorylase, starch phosphorylase, 1,4-alpha-D-glucan:phosphate alpha-D-glucosyltransferase, phosphorylase (ambiguous) click to see details on this item	[c] : glycogen_BACName: glycogen Formula: C6H10O5 Charge: 0 click to see details on this item + (0.5) piName: Phosphate Formula: HO4P Charge: -2 click to see details on this item		(0.5) g1pName: D-Glucose 1-phosphate Formula: C6H11O9P Charge: -2 click to see details on this item + (0.5) dxtrn1Name: Limited dextrin 1 Formula: C6H10O5 Charge: 0 click to see details on this item	T22F3.3	Bacterial digestion

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