WormFlux: mechanistic analysis of C. elegans metabolism

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? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
* : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.

Network Biomass WormPaths

FBAFlux Balance Analysis PEAPathway Enrichment Analysis

WormClustClustering- and enrichment-based association of genes with the metabolic network

Metabolite Overview

Abbreviation .....................................................	:	acgal
Name .....................................................	:	N-Acetyl-D-galactosamine, etc.N-Acetyl-D-chondrosamine, 2-Acetamido-2-deoxy-D-galactose
Model ID .....................................................	:	C01132
KEGG ID (?) Compounds in KEGG database that match this compound. .....................................................	:	C01132
Formula .....................................................	:	C8H15NO6
Charge .....................................................	:	0
Localization .....................................................	:	Cytosol, Extracellular
BiGG matches (?) Compounds in BiGG database that match this compound. .....................................................	:	acgal
Other associations .....................................................	:	See reaction table below.

In WormPaths (?) Pathway maps where this metabolite is represented are listed here. Letters after map name indicate the compartments the metabolite is placed in the map: (c) Cytosol (m) Mitochondria (e) Extracellular space .....................................................	:	Sphingolipid metabolism (c,e)

iCEL1314

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Reactions

ID

Enzyme

Reactants

Products

Genes (?) Multiple genes are separated by OR (I) or AND (&).

I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
& indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.

Pathway

RC04183Name: alpha-N-Acetyl-D-galactosaminide N-acetylgalactosaminohydrolase Type: Regular Location: Cytosol KEGG ID: R04183 click to see details on this item	3.2.1.49Name: alpha-N-acetylgalactosaminidase Other names: alpha-acetylgalactosaminidase, N-acetyl-alpha-D-galactosaminidase, N-acetyl-alpha-galactosaminidase, alpha-NAGAL, alpha-NAGA, alpha-GalNAcase click to see details on this item	[c] : gbside_ceName: globoside Formula: C45H81N2O22FULLRCO Charge: 0 click to see details on this item + acgalName: N-Acetyl-D-galactosamine Formula: C8H15NO6 Charge: 0 click to see details on this item		forssman_ceName: Forssman hapten Formula: C54H94N3O28R Charge: 0 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item	gana-1	Sphingolipid metabolism
RC04184Name: Trihexosylceramide N-acetylhexosaminohydrolase Type: Regular Location: Cytosol KEGG ID: R04184 click to see details on this item	3.2.1.52Name: beta-N-acetylhexosaminidase Other names: hexosaminidase, beta-acetylaminodeoxyhexosidase, N-acetyl-beta-D-hexosaminidase, N-acetyl-beta-hexosaminidase, beta-hexosaminidase, beta-acetylhexosaminidinase, beta-D-N-acetylhexosaminidase, beta-N-acetyl-D-hexosaminidase, beta-N-acetylglucosaminidase, hexosaminidase A, N-acetylhexosaminidase, beta-D-hexosaminidase click to see details on this item	[c] : thcrm_ceName: trihexosyl ceramide Formula: C37H68NO17FULLRCO Charge: 0 click to see details on this item + acgalName: N-Acetyl-D-galactosamine Formula: C8H15NO6 Charge: 0 click to see details on this item		gbside_ceName: globoside Formula: C45H81N2O22FULLRCO Charge: 0 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item	hex-1 \| hex-2 \| hex-3 \| hex-4 \| hex-5	Sphingolipid metabolism
TCE6002Name: N-acetylgalactosamine transport Type: Transport Location: Cytosol, Extracellular KEGG ID: NA click to see details on this item	Not applicable	acgalName: N-Acetyl-D-galactosamine Formula: C8H15NO6 Charge: 0 click to see details on this item[c]		acgalName: N-Acetyl-D-galactosamine Formula: C8H15NO6 Charge: 0 click to see details on this item[e]	Not determined	Transport
EX01132Name: N-Acetyl-D-galactosamine exchange Type: Exchange Location: Extracellular KEGG ID: NA click to see details on this item	Not applicable	acgalName: N-Acetyl-D-galactosamine Formula: C8H15NO6 Charge: 0 click to see details on this item[e]			Not applicable	Exchange with the environment

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