Network Biomass WormPaths

FBAFlux Balance Analysis PEAPathway Enrichment Analysis

WormClustClustering- and enrichment-based association of genes with the metabolic network

Metabolite Overview

Abbreviation .....................................................	:	pap
Name .....................................................	:	"Adenosine 3',5'-bisphosphate", etc.Adenosine 3',5'-bisphosphate, PAP, 3'-Phosphoadenylate, Phosphoadenosine phosphate
Model ID .....................................................	:	C00054
KEGG ID (?) Compounds in KEGG database that match this compound. .....................................................	:	C00054
Formula .....................................................	:	C10H11N5O10P2
Charge .....................................................	:	-4
Localization .....................................................	:	Mitochondria, Cytosol, Extracellular
BiGG matches (?) Compounds in BiGG database that match this compound. .....................................................	:	pap
Other associations .....................................................	:	See reaction table below (6 reactions in total)
In WormPaths (?) Pathway maps where this metabolite is represented are listed here. Letters after map name indicate the compartments the metabolite is placed in the map: (c) Cytosol (m) Mitochondria (e) Extracellular space .....................................................	:	Purine metabolism (c), Selenocompound metabolism (c), Sulfur metabolism (c)

iCEL1314

Reactions

ID

Enzyme

Reactants

Products

Genes (?) Multiple genes are separated by OR (I) or AND (&). I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme). & indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme). If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.

Pathway

RC00188Name: Adenosine 3,5-bisphosphate 3-phosphohydrolase Type: Regular Location: Cytosol KEGG ID: R00188 click to see details on this item	3.1.3.7Name: 3'(2'),5'-bisphosphate nucleotidase Other names: phosphoadenylate 3'-nucleotidase, 3'-phosphoadenylylsulfate 3'-phosphatase, 3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase click to see details on this item	[c] : h2oName: H2O Formula: H2O Charge: 0 click to see details on this item + papName: "Adenosine 3',5'-bisphosphate" Formula: C10H11N5O10P2 Charge: -4 click to see details on this item		ampName: AMP Formula: C10H12N5O7P Charge: -2 click to see details on this item + piName: Phosphate Formula: HO4P Charge: -2 click to see details on this item	bpnt-1 | gpap-1	Purine metabolism
RC00507Name: 3'-phosphoadenylyl-sulfate sulfohydrolase Type: Regular Location: Cytosol KEGG ID: R00507 click to see details on this item	3.6.1.9Name: nucleotide diphosphatase Other names: nucleotide pyrophosphatase, nucleotide-sugar pyrophosphatase click to see details on this item	[c] : papsName: 3'-Phosphoadenylyl sulfate Formula: C10H11N5O13P2S Charge: -4 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item		so4Name: Sulfate Formula: O4S Charge: -2 click to see details on this item + papName: "Adenosine 3',5'-bisphosphate" Formula: C10H11N5O10P2 Charge: -4 click to see details on this item + (2) hName: H+ Formula: H Charge: 1 click to see details on this item	C27A7.1 | C27A7.3	Purine metabolism
RC04940Name: 3'-Phosphoadenylylselenate + NADPH <=> Adenosine 3',5'-bisphosphate + Selenite + NADP+ + H+ Type: Regular Location: Cytosol KEGG ID: R04940 click to see details on this item	Unknown	[c] : 3padselName: 3'-Phosphoadenylylselenate Formula: C10H11N5O13P2Se Charge: -4 click to see details on this item + nadphName: Nicotinamide adenine dinucleotide phosphate - reduced Formula: C21H26N7O17P3 Charge: -4 click to see details on this item		papName: "Adenosine 3',5'-bisphosphate" Formula: C10H11N5O10P2 Charge: -4 click to see details on this item + selntName: Selenite Formula: O3Se Charge: -2 click to see details on this item + nadpName: Nicotinamide adenine dinucleotide phosphate Formula: C21H25N7O17P3 Charge: -3 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item	Unknown	Selenocompound metabolism
TCM1095Name: "Adenosine 3',5'-bisphosphate" transport Type: Transport Location: Cytosol, Mitochondria KEGG ID: NA click to see details on this item	Not applicable	papName: "Adenosine 3',5'-bisphosphate" Formula: C10H11N5O10P2 Charge: -4 click to see details on this item[c]		papName: "Adenosine 3',5'-bisphosphate" Formula: C10H11N5O10P2 Charge: -4 click to see details on this item[m]	Not determined	Transport
TCE1133Name: "Adenosine 3',5'-bisphosphate" transport Type: Transport Location: Cytosol, Extracellular KEGG ID: NA click to see details on this item	Not applicable	papName: "Adenosine 3',5'-bisphosphate" Formula: C10H11N5O10P2 Charge: -4 click to see details on this item[e]		papName: "Adenosine 3',5'-bisphosphate" Formula: C10H11N5O10P2 Charge: -4 click to see details on this item[c]	Not determined	Transport
EX00054Name: "Adenosine 3',5'-bisphosphate" exchange Type: Exchange Location: Extracellular KEGG ID: NA click to see details on this item	Not applicable	papName: "Adenosine 3',5'-bisphosphate" Formula: C10H11N5O10P2 Charge: -4 click to see details on this item[e]			Not applicable	Exchange with the environment

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