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(?) Enter a search word or phrase (left box), optionally select an appropriate field (middle), and hit the search button or press enter. This search engine is NOT case sensitive.

Use wild characters " ? " and " * " for efficient search:
  • ? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
  • * : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.
Network Biomass WormPaths
FBAFlux Balance Analysis PEAPathway Enrichment Analysis
WormClustClustering- and enrichment-based association of genes with the metabolic network
Enzyme Overview
Enzyme (?) Identification in Enzyme Commission (EC) numbering system. ..................................................... : 2.5.1.29
Name ..................................................... : Geranylgeranyl diphosphate synthase, etc.Geranylgeranyl-diphosphate synthase, Geranylgeranyl pyrophosphate synthetase, Geranylgeranyl-PP synthetase, Farnesyltransferase, Geranylgeranyl pyrophosphate synthase, Farnesyltranstransferase (obsolete)
KO (?) The KEGG orthology group (KO) that is associated with this enzyme. ..................................................... : Not determined
Genes ..................................................... : coq-1, fdps-1
Localization ..................................................... : Cytosol
Other associations ..................................................... : See reaction table below.
Reactions
ID Enzyme Reactants Products Genes (?) Multiple genes are separated by OR (I) or AND (&).

I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
& indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses. 		Pathway
RC02061Name: geranylgeranyl diphosphate synthase
Type: Regular
Location: Cytosol
KEGG ID: R02061

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2.5.1.29Name: geranylgeranyl diphosphate synthase
Other names: geranylgeranyl-diphosphate synthase, geranylgeranyl pyrophosphate synthetase, geranylgeranyl-PP synthetase, farnesyltransferase, geranylgeranyl pyrophosphate synthase, farnesyltranstransferase (obsolete)

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[c] : frdpName: Farnesyl diphosphate
Formula: C15H25O7P2
Charge: -3




click to see details on this item + ipdpName: Isopentenyl diphosphate
Formula: C5H9O7P2
Charge: -3




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ppiName: Diphosphate
Formula: HO7P2
Charge: -3




click to see details on this item + ttc-ggdpName: "trans,trans,cis-Geranylgeranyl diphosphate"
Formula: C20H33O7P2
Charge: -3




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coq-1 | fdps-1
Mevalonate metabolism
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