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Use wild characters " ? " and " * " for efficient search:
  • ? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
  • * : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.
Network Biomass WormPaths
FBAFlux Balance Analysis PEAPathway Enrichment Analysis
WormClustClustering- and enrichment-based association of genes with the metabolic network
Metabolite Overview
Abbreviation ..................................................... : 3dsphgn_ce
Name ..................................................... : 3-Dehydrosphinganine
Model ID ..................................................... : CC0206
KEGG ID (?) Compounds in KEGG database that match this compound. ..................................................... : Not available
Formula ..................................................... : C19H40NO2
Charge ..................................................... : +1
Localization ..................................................... : Cytosol
BiGG matches (?) Compounds in BiGG database that match this compound. ..................................................... : 3dsphgn
Other associations ..................................................... : See reaction table below.

In WormPaths (?) Pathway maps where this metabolite is represented are listed here.

Letters after map name indicate the compartments the metabolite is placed in the map:

(c) Cytosol
(m) Mitochondria
(e) Extracellular space ..................................................... 		: Serine metabolism (c), Sphingolipid metabolism (c)
Comments
  • Charge based on matching BiGG compound.

    • Reactions
    ID Enzyme Reactants Products Genes (?) Multiple genes are separated by OR (I) or AND (&).

    I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
    & indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

    If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.     		Pathway
    RC01281Name: Palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating)
    Type: Regular
    Location: Cytosol
    KEGG ID: R01281

    click to see details on this item
    2.3.1.50Name: serine C-palmitoyltransferase
    Other names: serine palmitoyltransferase, SPT, 3-oxosphinganine synthetase, acyl-CoA:serine C-2 acyltransferase decarboxylating

    click to see details on this item
    [c] : hName: H+
    Formula: H
    Charge: 1




    click to see details on this item     + fa17p0isocoaName: Fatty acyl (C17:iso) coa
    Formula: C38H64N7O17P3S
    Charge: -4




    click to see details on this item     + ser-LName: L-Serine
    Formula: C3H7NO3
    Charge: 0




    click to see details on this item
    3dsphgn_ceName: 3-Dehydrosphinganine
    Formula: C19H40NO2
    Charge: 1




    click to see details on this item     + co2Name: CO2
    Formula: CO2
    Charge: 0




    click to see details on this item     + coaName: Coenzyme A
    Formula: C21H32N7O16P3S
    Charge: -4




    click to see details on this item
    sptl-1 | sptl-2 | sptl-3
    Serine metabolism
    RC02978Name: 3-dehydrosphinganine reductase
    Type: Regular
    Location: Cytosol
    KEGG ID: R02978

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    1.1.1.102Name: 3-dehydrosphinganine reductase
    Other names: D-3-dehydrosphinganine reductase, D-3-oxosphinganine reductase, DSR, 3-oxosphinganine reductase, 3-oxosphinganine:NADPH oxidoreductase, D-3-oxosphinganine:B-NADPH oxidoreductase

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    [c] : 3dsphgn_ceName: 3-Dehydrosphinganine
    Formula: C19H40NO2
    Charge: 1




    click to see details on this item     + hName: H+
    Formula: H
    Charge: 1




    click to see details on this item     + nadphName: Nicotinamide adenine dinucleotide phosphate - reduced
    Formula: C21H26N7O17P3
    Charge: -4




    click to see details on this item
    nadpName: Nicotinamide adenine dinucleotide phosphate
    Formula: C21H25N7O17P3
    Charge: -3




    click to see details on this item     + sphgn_ceName: Sphinganine
    Formula: C19H42NO2
    Charge: 1




    click to see details on this item
    To be determined
    Sphingolipid metabolism
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