HOME DOWNLOAD CITATION HELP
Umass Logo PSB Logo
(?) Enter a search word or phrase (left box), optionally select an appropriate field (middle), and hit the search button or press enter. This search engine is NOT case sensitive.

Use wild characters " ? " and " * " for efficient search:
  • ? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
  • * : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.
Network Biomass WormPaths
FBAFlux Balance Analysis PEAPathway Enrichment Analysis
WormClustClustering- and enrichment-based association of genes with the metabolic network
Metabolite Overview
Abbreviation ..................................................... : vacc
Name ..................................................... : Vaccenic acid
Model ID ..................................................... : CC0135
KEGG ID (?) Compounds in KEGG database that match this compound. ..................................................... : Not available
Formula ..................................................... : C18H33O2
Charge ..................................................... : -1
Localization ..................................................... : Cytosol, Extracellular
BiGG matches (?) Compounds in BiGG database that match this compound. ..................................................... : vacc
Other associations ..................................................... : See reaction table below.

In WormPaths (?) Pathway maps where this metabolite is represented are listed here.

Letters after map name indicate the compartments the metabolite is placed in the map:

(c) Cytosol
(m) Mitochondria
(e) Extracellular space ..................................................... 		: Fatty acid biosynthesis (c,e)
Comments
ERROR
Reactions
ID Enzyme Reactants Products Genes (?) Multiple genes are separated by OR (I) or AND (&).

I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
& indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses. 		Pathway
RCC0130Name: fatty-acid--CoA ligase (vacc)
Type: Regular
Location: Cytosol
KEGG ID: R00390

click to see details on this item
6.2.1.3Name: long-chain-fatty-acid---CoA ligase
Other names: acyl-CoA synthetase, fatty acid thiokinase (long chain), acyl-activating enzyme, palmitoyl-CoA synthase, lignoceroyl-CoA synthase, arachidonyl-CoA synthetase, acyl coenzyme A synthetase, acyl-CoA ligase, palmitoyl coenzyme A synthetase, thiokinase, palmitoyl-CoA ligase, acyl-coenzyme A ligase, fatty acid CoA ligase, long-chain fatty acyl coenzyme A synthetase, oleoyl-CoA synthetase, stearoyl-CoA synthetase, long chain fatty acyl-CoA synthetase, long-chain acyl CoA synthetase, fatty acid elongase, LCFA synthetase, pristanoyl-CoA synthetase, ACS3, long-chain acyl-CoA synthetase I, long-chain acyl-CoA synthetase II, fatty acyl-coenzyme A synthetase, long-chain acyl-coenzyme A synthetase, FAA1

click to see details on this item
[c] : atpName: ATP
Formula: C10H12N5O13P3
Charge: -4




click to see details on this item + coaName: Coenzyme A
Formula: C21H32N7O16P3S
Charge: -4




click to see details on this item + vaccName: Vaccenic acid
Formula: C18H33O2
Charge: -1




click to see details on this item
ampName: AMP
Formula: C10H12N5O7P
Charge: -2




click to see details on this item + ppiName: Diphosphate
Formula: HO7P2
Charge: -3




click to see details on this item + vacccoaName: Vaccenyl coenzyme A
Formula: C39H64N7O17P3S
Charge: -4




click to see details on this item
acs-2 | acs-3 | acs-4 | acs-5 | acs-13 | acs-15 | acs-17 | acs-18
Fatty acid biosynthesis
DGR0004Name: Bacterial fatty acid composition
Type: Degradation
Location: Cytosol
KEGG ID: NA

click to see details on this item
Not applicable
[c] : Rtotal_BACName: R total from bacterial diet
Formula: RCO2
Charge: -1




click to see details on this item
(0.056282) ttdcaName: tetradecanoate (n-C14:0)
Formula: C14H27O2
Charge: -1




click to see details on this item + (0.430027) hdcaName: Hexadecanoate (n-C16:0)
Formula: C16H31O2
Charge: -1




click to see details on this item + (0.042082) fa16p1n7Name: Palmitoleic acid
Formula: C16H29O2
Charge: -1




click to see details on this item + (0.311026) fa17c9Name: cis-9,10-methylenehexadecanoic acid
Formula: C17H31O2
Charge: -1




click to see details on this item + (0.065863) fa19c11Name: cis-11,12-methyleneoctadecanoic acid
Formula: C19H35O2
Charge: -1




click to see details on this item + (0.09472) vaccName: Vaccenic acid
Formula: C18H33O2
Charge: -1




click to see details on this item
Not applicable
Bacterial digestion
TCE0576Name: Vaccenic acid transport
Type: Transport
Location: Cytosol, Extracellular
KEGG ID: NA

click to see details on this item
Not applicable
vaccName: Vaccenic acid
Formula: C18H33O2
Charge: -1




click to see details on this item[e]
vaccName: Vaccenic acid
Formula: C18H33O2
Charge: -1




click to see details on this item[c]
Not determined
Transport
EXC0135Name: Vaccenic acid exchange
Type: Exchange
Location: Extracellular
KEGG ID: NA

click to see details on this item
Not applicable
vaccName: Vaccenic acid
Formula: C18H33O2
Charge: -1




click to see details on this item[e]
Not applicable
Exchange with the environment
The information and tools provided in this website are to be used for academic purposes only.