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Use wild characters " ? " and " * " for efficient search:
  • ? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
  • * : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.
Network Biomass WormPaths
FBAFlux Balance Analysis PEAPathway Enrichment Analysis
WormClustClustering- and enrichment-based association of genes with the metabolic network
Metabolite Overview
Abbreviation ..................................................... : thym
Name ..................................................... : Thymine, etc.5-Methyluracil
Model ID ..................................................... : C00178
KEGG ID (?) Compounds in KEGG database that match this compound. ..................................................... : C00178
Formula ..................................................... : C5H6N2O2
Charge ..................................................... : 0
Localization ..................................................... : Cytosol, Extracellular
BiGG matches (?) Compounds in BiGG database that match this compound. ..................................................... : thym
Other associations ..................................................... : See reaction table below.

In WormPaths (?) Pathway maps where this metabolite is represented are listed here.

Letters after map name indicate the compartments the metabolite is placed in the map:

(c) Cytosol
(m) Mitochondria
(e) Extracellular space ..................................................... 		: Pyrimidine metabolism (c)
Comments
ERROR
Reactions
ID Enzyme Reactants Products Genes (?) Multiple genes are separated by OR (I) or AND (&).

I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
& indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses. 		Pathway
RC01415Name: 5,6-Dihydrothymine:NADP+ oxidoreductase
Type: Regular
Location: Cytosol
KEGG ID: R01415

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1.3.1.2Name: dihydropyrimidine dehydrogenase (NADP+)
Other names: dihydrothymine dehydrogenase, dihydrouracil dehydrogenase (NADP+), 4,5-dihydrothymine: oxidoreductase, DPD, DHPDH, dehydrogenase, dihydrouracil (nicotinamide adenine dinucleotide phosphate), DHU dehydrogenase, hydropyrimidine dehydrogenase, dihydropyrimidine dehydrogenase (NADP)

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[c] : 56dthmName: "5,6-Dihydrothymine"
Formula: C5H8N2O2
Charge: 0




click to see details on this item + nadpName: Nicotinamide adenine dinucleotide phosphate
Formula: C21H25N7O17P3
Charge: -3




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hName: H+
Formula: H
Charge: 1




click to see details on this item + nadphName: Nicotinamide adenine dinucleotide phosphate - reduced
Formula: C21H26N7O17P3
Charge: -4




click to see details on this item + thymName: Thymine
Formula: C5H6N2O2
Charge: 0




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dpyd-1
Pyrimidine metabolism
RC01570Name: thymidine:phosphate deoxy-alpha-D-ribosyltransferase
Type: Regular
Location: Cytosol
KEGG ID: R01570

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2.4.2.4Name: thymidine phosphorylase
Other names: pyrimidine phosphorylase, thymidine-orthophosphate deoxyribosyltransferase, animal growth regulators, blood platelet-derived endothelial cell growth factors, blood platelet-derived endothelial cell growth factor, deoxythymidine phosphorylase, gliostatins, pyrimidine deoxynucleoside phosphorylase, thymidine:phosphate deoxy-D-ribosyltransferase

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[c] : piName: Phosphate
Formula: HO4P
Charge: -2




click to see details on this item + thymdName: Thymidine
Formula: C10H14N2O5
Charge: 0




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2dr1pName: 2-Deoxy-D-ribose 1-phosphate
Formula: C5H9O7P
Charge: -2




click to see details on this item + thymName: Thymine
Formula: C5H6N2O2
Charge: 0




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upp-1
Pyrimidine metabolism
TCE0518Name: Thymine transport
Type: Transport
Location: Cytosol, Extracellular
KEGG ID: NA

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Not applicable
thymName: Thymine
Formula: C5H6N2O2
Charge: 0




click to see details on this item[e]
thymName: Thymine
Formula: C5H6N2O2
Charge: 0




click to see details on this item[c]
Not determined
Transport
EX00178Name: Thymine exchange
Type: Exchange
Location: Extracellular
KEGG ID: NA

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Not applicable
thymName: Thymine
Formula: C5H6N2O2
Charge: 0




click to see details on this item[e]
Not applicable
Exchange with the environment
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