WormFlux: mechanistic analysis of C. elegans metabolism

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Use wild characters " ? " and " * " for efficient search:

? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
* : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.

Network Biomass WormPaths

PEAPathway Enrichment Analysis

WormClustClustering- and enrichment-based association of genes with the metabolic network WPSWorm Perturb-Seq portal

Enzyme Overview

Enzyme (?) Identification in Enzyme Commission (EC) numbering system. .....................................................	:	1.3.8.9
Name .....................................................	:	Very-long-chain acyl-CoA dehydrogenase, etc.ACADVL (gene name).
KO (?) The KEGG orthology group (KO) that is associated with this enzyme. .....................................................	:	K09479ACADVL; very long chain acyl-CoA dehydrogenase [EC:1.3.8.9]
Genes .....................................................	:	acdh-12
Localization .....................................................	:	Mitochondria
Other associations .....................................................	:	See reaction table below.

External links

Reactions

ID

Enzyme

Reactants

Products

Genes (?) Multiple genes are separated by OR (I) or AND (&).

I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
& indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.

Pathway

RM01282Name: Palmitoyl-CoA:oxygen 2-oxidoreductase Type: Regular Location: Mitochondria KEGG ID: R01282 click to see details on this item	1.3.8.7Name: medium-chain acyl-CoA dehydrogenase Other names: fatty acyl coenzyme A dehydrogenase (ambiguous), acyl coenzyme A dehydrogenase (ambiguous), acyl dehydrogenase (ambiguous), fatty-acyl-CoA dehydrogenase (ambiguous), acyl CoA dehydrogenase (ambiguous), general acyl CoA dehydrogenase (ambiguous), medium-chain acyl-coenzyme A dehydrogenase, acyl-CoA:(acceptor) 2,3-oxidoreductase (ambiguous), ACADM (gene name). click to see details on this item 1.3.8.9Name: very-long-chain acyl-CoA dehydrogenase Other names: ACADVL (gene name). click to see details on this item	[m] : etfoxName: Electron transfer flavoprotein oxidized Formula: R Charge: 0 click to see details on this item + pmtcoaName: Palmitoyl-CoA (n-C16:0CoA) Formula: C37H62N7O17P3S Charge: -4 click to see details on this item		etfrdName: Electron transfer flavoprotein reduced Formula: RH2 Charge: 0 click to see details on this item + hdd2coaName: trans-Hexadec-2-enoyl-CoA Formula: C37H60N7O17P3S Charge: -4 click to see details on this item	(acdh-7 \| acdh-8 \| acdh-10) \| acdh-12	Mitochondrial fatty acid degradation
RM03990Name: Tetradecanoyl-CoA:(acceptor) 2,3-oxidoreductase Type: Regular Location: Mitochondria KEGG ID: R03990 click to see details on this item	1.3.8.7Name: medium-chain acyl-CoA dehydrogenase Other names: fatty acyl coenzyme A dehydrogenase (ambiguous), acyl coenzyme A dehydrogenase (ambiguous), acyl dehydrogenase (ambiguous), fatty-acyl-CoA dehydrogenase (ambiguous), acyl CoA dehydrogenase (ambiguous), general acyl CoA dehydrogenase (ambiguous), medium-chain acyl-coenzyme A dehydrogenase, acyl-CoA:(acceptor) 2,3-oxidoreductase (ambiguous), ACADM (gene name). click to see details on this item 1.3.8.9Name: very-long-chain acyl-CoA dehydrogenase Other names: ACADVL (gene name). click to see details on this item	[m] : etfoxName: Electron transfer flavoprotein oxidized Formula: R Charge: 0 click to see details on this item + tdcoaName: Tetradecanoyl-CoA (n-C14:0CoA) Formula: C35H58N7O17P3S Charge: -4 click to see details on this item		etfrdName: Electron transfer flavoprotein reduced Formula: RH2 Charge: 0 click to see details on this item + td2coaName: trans-Tetradec-2-enoyl-CoA Formula: C35H56N7O17P3S Charge: -4 click to see details on this item	(acdh-7 \| acdh-8 \| acdh-10) \| acdh-12	Mitochondrial fatty acid degradation

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