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(?) Enter a search word or phrase (left box), optionally select an appropriate field (middle), and hit the search button or press enter. This search engine is NOT case sensitive.

Use wild characters " ? " and " * " for efficient search:
  • ? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
  • * : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.
Network Biomass WormPaths
FBAFlux Balance Analysis PEAPathway Enrichment Analysis
WormClustClustering- and enrichment-based association of genes with the metabolic network
Metabolite Overview
Abbreviation ..................................................... : h_pumped
Name ..................................................... : proton (pumped)
Model ID ..................................................... : CC0200
KEGG ID (?) Compounds in KEGG database that match this compound. ..................................................... : Not available
Formula ..................................................... : H
Charge ..................................................... : +1
Localization ..................................................... : Cytosol
BiGG matches (?) Compounds in BiGG database that match this compound. ..................................................... : Not available
Other associations ..................................................... : See reaction table below.

In WormPaths (?) Pathway maps where this metabolite is represented are listed here.

Letters after map name indicate the compartments the metabolite is placed in the map:

(c) Cytosol
(m) Mitochondria
(e) Extracellular space ..................................................... 		: Not yet represented in WormPaths maps.
Comments
  • Introduced during the first model update to separate V-ATPase function from that of F-ATPase.

    • Reactions
    ID Enzyme Reactants Products Genes (?) Multiple genes are separated by OR (I) or AND (&).

    I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
    & indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

    If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.     		Pathway
    RCC0250Name: V-ATPase
    Type: Regular
    Location: Cytosol
    KEGG ID: NA

    click to see details on this item
    3.6.3.14Name: H+-transporting two-sector ATPase
    Other names: ATP synthase, F1-ATPase, FoF1-ATPase, H+-transporting ATPase, mitochondrial ATPase, coupling factors (F0, F1 and CF1), chloroplast ATPase, bacterial Ca2+/Mg2+ ATPase

    click to see details on this item
    [c] : atpName: ATP
    Formula: C10H12N5O13P3
    Charge: -4




    click to see details on this item     + h2oName: H2O
    Formula: H2O
    Charge: 0




    click to see details on this item
    adpName: ADP
    Formula: C10H12N5O10P2
    Charge: -3




    click to see details on this item     + h_pumpedName: proton (pumped)
    Formula: H
    Charge: 1




    click to see details on this item     + piName: Phosphate
    Formula: HO4P
    Charge: -2




    click to see details on this item
    vha-13 & (vha-12 | spe-5) & vha-11 & vha-14 & vha-8 & vha-9 & vha-10 & (vha-18 | vha-15) & (vha-7 | vha-5 | vha-6 | unc-32) & (vha-2 | vha-1 | vha-4 | vha-3) & vha-17 & vha-19
    Miscellaneous
    DMN0100Name: vATPase-pumped proton demand
    Type: Demand
    Location: Cytosol
    KEGG ID: NA

    click to see details on this item
    Not applicable
    h_pumpedName: proton (pumped)
    Formula: H
    Charge: 1




    click to see details on this item    [c]
    Not applicable
    Demand reactions
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