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  • ? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
  • * : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.
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PEAPathway Enrichment Analysis
WormClustClustering- and enrichment-based association of genes with the metabolic network WPSWorm Perturb-Seq portal
Metabolite Overview
Abbreviation ..................................................... : Rtotal4coa
Name ..................................................... : R total 4 coenzyme A
Model ID ..................................................... : CC0084
KEGG ID (?) Compounds in KEGG database that match this compound. ..................................................... : Not available
Formula ..................................................... : CO2FULLR4C21H31N7O15P3S
Charge ..................................................... : -4
Localization ..................................................... : Cytosol
BiGG matches (?) Compounds in BiGG database that match this compound. ..................................................... : Rtotalcoa, Rtotal2coa, Rtotal3coa, acoa
Other associations ..................................................... : See reaction table below.

In WormPaths (?) Pathway maps where this metabolite is represented are listed here.

Letters after map name indicate the compartments the metabolite is placed in the map:

(c) Cytosol
(m) Mitochondria
(e) Extracellular space ..................................................... 		: Glycerolipid metabolism (c)
Comments
  • Charge is based on matching BiGG compounds.

    • Reactions
    ID Enzyme Reactants Products Genes (?) Multiple genes are separated by OR (I) or AND (&).

    I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
    & indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

    If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.     		Pathway
    RCC0151Name: fatty-acid--CoA ligase (Rtotal4)
    Type: Regular
    Location: Cytosol
    KEGG ID: R00390

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    6.2.1.3Name: long-chain-fatty-acid---CoA ligase
    Other names: acyl-CoA synthetase, fatty acid thiokinase (long chain), acyl-activating enzyme, palmitoyl-CoA synthase, lignoceroyl-CoA synthase, arachidonyl-CoA synthetase, acyl coenzyme A synthetase, acyl-CoA ligase, palmitoyl coenzyme A synthetase, thiokinase, palmitoyl-CoA ligase, acyl-coenzyme A ligase, fatty acid CoA ligase, long-chain fatty acyl coenzyme A synthetase, oleoyl-CoA synthetase, stearoyl-CoA synthetase, long chain fatty acyl-CoA synthetase, long-chain acyl CoA synthetase, fatty acid elongase, LCFA synthetase, pristanoyl-CoA synthetase, ACS3, long-chain acyl-CoA synthetase I, long-chain acyl-CoA synthetase II, fatty acyl-coenzyme A synthetase, long-chain acyl-coenzyme A synthetase, FAA1

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    [c] : atpName: ATP
    Formula: C10H12N5O13P3
    Charge: -4




    click to see details on this item     + coaName: Coenzyme A
    Formula: C21H32N7O16P3S
    Charge: -4




    click to see details on this item     + Rtotal4Name: R total 4 position
    Formula: CO2FULLR4
    Charge: -1




    click to see details on this item
    ampName: AMP
    Formula: C10H12N5O7P
    Charge: -2




    click to see details on this item     + ppiName: Diphosphate
    Formula: HO7P2
    Charge: -3




    click to see details on this item     + Rtotal4coaName: R total 4 coenzyme A
    Formula: CO2FULLR4C21H31N7O15P3S
    Charge: -4




    click to see details on this item
    acs-2 | acs-3 | acs-4 | acs-5 | acs-13 | acs-15 | acs-17 | acs-18
    Miscellaneous
    RCC0079Name: acyl-CoA:sn-glycerol-3-phosphate 1-O-acyltransferase (acting on Rtotal4 group)
    Type: Regular
    Location: Cytosol
    KEGG ID: R00851

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    2.3.1.15Name: glycerol-3-phosphate 1-O-acyltransferase
    Other names: alpha-glycerophosphate acyltransferase, 3-glycerophosphate acyltransferase, ACP:sn-glycerol-3-phosphate acyltransferase, glycerol 3-phosphate acyltransferase, glycerol phosphate acyltransferase, glycerol phosphate transacylase, glycerophosphate acyltransferase, glycerophosphate transacylase, sn-glycerol 3-phosphate acyltransferase, sn-glycerol-3-phosphate acyltransferase, glycerol-3-phosphate O-acyltransferase (ambiguous)

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    [c] : Rtotal4coaName: R total 4 coenzyme A
    Formula: CO2FULLR4C21H31N7O15P3S
    Charge: -4




    click to see details on this item     + glyc3pName: Glycerol 3-phosphate
    Formula: C3H7O6P
    Charge: -2




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    alpa_tagName: Lysophosphatidic acid (TAG)
    Formula: C3H6O5PFULLR4CO2
    Charge: -2




    click to see details on this item     + coaName: Coenzyme A
    Formula: C21H32N7O16P3S
    Charge: -4




    click to see details on this item
    acl-6 | (acl-4 | acl-5)
    Glycerolipid metabolism
    BIO0012Name: Fatty acid composition (TAG)
    Type: Biomass
    Location: Cytosol
    KEGG ID: NA

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    Not applicable
    [c] : Rtotal3coaName: R total 3 Coenzyme A
    Formula: CO2FULLR3C21H31N7O15P3S
    Charge: -4




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    Rtotal4coaName: R total 4 coenzyme A
    Formula: CO2FULLR4C21H31N7O15P3S
    Charge: -4




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    Not applicable
    Biomass assembly
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