Network Biomass WormPaths

PEAPathway Enrichment Analysis

WormClustClustering- and enrichment-based association of genes with the metabolic network WPSWorm Perturb-Seq portal

Metabolite Overview

Abbreviation .....................................................	:	5mdru1p
Name .....................................................	:	5-Methylthio-5-deoxy-D-ribulose 1-phosphate, etc.S-Methyl-5-thio-D-ribulose 1-phosphate
Model ID .....................................................	:	C04582
KEGG ID (?) Compounds in KEGG database that match this compound. .....................................................	:	C04582
Formula .....................................................	:	C6H11O7PS
Charge .....................................................	:	-2
Localization .....................................................	:	Cytosol
BiGG matches (?) Compounds in BiGG database that match this compound. .....................................................	:	5mdru1p
Other associations .....................................................	:	See reaction table below.
In WormPaths (?) Pathway maps where this metabolite is represented are listed here. Letters after map name indicate the compartments the metabolite is placed in the map: (c) Cytosol (m) Mitochondria (e) Extracellular space .....................................................	:	Methionine salvage (c)

iCEL1314

Reactions

ID

Enzyme

Reactants

Products

Genes (?) Multiple genes are separated by OR (I) or AND (&). I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme). & indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme). If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.

Pathway

RC07392Name: S-Methyl-5-thio-D-ribulose-1-phosphate hydro-lyase Type: Regular Location: Cytosol KEGG ID: R07392 click to see details on this item	4.2.1.109Name: methylthioribulose 1-phosphate dehydratase Other names: 1-PMT-ribulose dehydratase, S-methyl-5-thio-D-ribulose-1-phosphate hydro-lyase click to see details on this item	[c] : 5mdru1pName: 5-Methylthio-5-deoxy-D-ribulose 1-phosphate Formula: C6H11O7PS Charge: -2 click to see details on this item		dkmppName: "2,3-diketo-5-methylthio-1-phosphopentane" Formula: C6H9O6PS Charge: -2 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item	ZC373.5	Methionine salvage
RC04420Name: 5-methylthioribose-1-phosphate isomerase Type: Regular Location: Cytosol KEGG ID: R04420 click to see details on this item	5.3.1.23Name: S-methyl-5-thioribose-1-phosphate isomerase Other names: methylthioribose 1-phosphate isomerase, 1-PMTR isomerase, 5-methylthio-5-deoxy-D-ribose-1-phosphate ketol-isomerase, S-methyl-5-thio-5-deoxy-D-ribose-1-phosphate ketol-isomerase, S-methyl-5-thio-5-deoxy-D-ribose-1-phosphate aldose-ketose-isomerase, 1-phospho-5'-S-methylthioribose isomerase, S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase click to see details on this item	[c] : 5mdr1pName: 5-Methylthio-5-deoxy-D-ribose 1-phosphate Formula: C6H11O7PS Charge: -2 click to see details on this item		5mdru1pName: 5-Methylthio-5-deoxy-D-ribulose 1-phosphate Formula: C6H11O7PS Charge: -2 click to see details on this item	C01G10.9	Methionine salvage

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