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Use wild characters " ? " and " * " for efficient search:
  • ? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
  • * : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.
Network Biomass WormPaths
FBAFlux Balance Analysis PEAPathway Enrichment Analysis
WormClustClustering- and enrichment-based association of genes with the metabolic network
Metabolite Overview
Abbreviation ..................................................... : peplys
Name ..................................................... : Peptidyl-L-lysine, etc.Protein lysine
Model ID ..................................................... : C02188
KEGG ID (?) Compounds in KEGG database that match this compound. ..................................................... : C02188
Formula ..................................................... : XC6H13N2O
Charge ..................................................... : +1
Localization ..................................................... : Cytosol, Extracellular
BiGG matches (?) Compounds in BiGG database that match this compound. ..................................................... : peplys
Other associations ..................................................... : See reaction table below.

In WormPaths (?) Pathway maps where this metabolite is represented are listed here.

Letters after map name indicate the compartments the metabolite is placed in the map:

(c) Cytosol
(m) Mitochondria
(e) Extracellular space ..................................................... 		: Not yet represented in WormPaths maps.
Comments
  • Formula and charge based on MetaCyc.

    • Reactions
    ID Enzyme Reactants Products Genes (?) Multiple genes are separated by OR (I) or AND (&).

    I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
    & indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

    If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.     		Pathway
    RCC0159Name: artificial transformation of peptide to peptidyl-lysine
    Type: Regular
    Location: Cytosol
    KEGG ID: NA

    click to see details on this item
    Not applicable
    [c] : pepXName: Random peptide (special aminoacid carrier)
    Formula: X
    Charge: 0




    click to see details on this item     + lys-LName: L-Lysine
    Formula: C6H15N2O2
    Charge: 1




    click to see details on this item
    peplysName: Peptidyl-L-lysine
    Formula: XC6H13N2O
    Charge: 1




    click to see details on this item     + h2oName: H2O
    Formula: H2O
    Charge: 0




    click to see details on this item
    Not applicable
    Carnitine biosynthesis
    RCC0177Name: Protein-lysine methylase
    Type: Regular
    Location: Cytosol
    KEGG ID: R03875;R04866;R04867

    click to see details on this item
    2.1.1.43Name: histone-lysine N-methyltransferase
    Other names: protein methylase III, protein methylase 3, protein (lysine) methyltransferase, protein methyltransferase II, protein-lysine N-methyltransferase, histone H1-specific S-adenosylmethionine:protein-lysine N-methyltransferase, S-adenosyl-L-methionine:histone-L-lysine 6-N-methyltransferase

    click to see details on this item
    [c] : peplysName: Peptidyl-L-lysine
    Formula: XC6H13N2O
    Charge: 1




    click to see details on this item     + (3) ametName: S-Adenosyl-L-methionine
    Formula: C15H23N6O5S
    Charge: 1




    click to see details on this item
    peptmelysName: Protein N6,N6,N6-trimethyl-L-lysine
    Formula: XC9H19N2O
    Charge: 1




    click to see details on this item     + (3) ahcysName: S-Adenosyl-L-homocysteine
    Formula: C14H20N6O5S
    Charge: 0




    click to see details on this item     + (3) hName: H+
    Formula: H
    Charge: 1




    click to see details on this item
    [set-16 | lin-59 | (met-1 | set-12) | set-2 | met-2 | set-11 | mes-2 | set-23 | (dot-1.1 | dot-1.2 | dot-1.3 | dot-1.4 | dot-1.5) | set-4 | set-1] | [set-13 | set-15 | set-21 | set-32 | set-33 | set-6]
    Carnitine biosynthesis
    TCE0825Name: Peptidyl-L-lysine transport
    Type: Transport
    Location: Cytosol, Extracellular
    KEGG ID: NA

    click to see details on this item
    Not applicable
    peplysName: Peptidyl-L-lysine
    Formula: XC6H13N2O
    Charge: 1




    click to see details on this item    [e]
    peplysName: Peptidyl-L-lysine
    Formula: XC6H13N2O
    Charge: 1




    click to see details on this item    [c]
    Not determined
    Transport
    EX02188Name: Peptidyl-L-lysine exchange
    Type: Exchange
    Location: Extracellular
    KEGG ID: NA

    click to see details on this item
    Not applicable
    peplysName: Peptidyl-L-lysine
    Formula: XC6H13N2O
    Charge: 1




    click to see details on this item    [e]
    Not applicable
    Exchange with the environment
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