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Network Biomass WormPaths
FBAFlux Balance Analysis PEAPathway Enrichment Analysis
WormClustClustering- and enrichment-based association of genes with the metabolic network
Metabolite Overview
Abbreviation ..................................................... : 3htmelys
Name ..................................................... : 3-Hydroxy-N6,N6,N6-trimethyl-L-lysine
Model ID ..................................................... : C01259
KEGG ID (?) Compounds in KEGG database that match this compound. ..................................................... : C01259
Formula ..................................................... : C9H21N2O3
Charge ..................................................... : +1
Localization ..................................................... : Mitochondria, Cytosol
BiGG matches (?) Compounds in BiGG database that match this compound. ..................................................... : 3htmelys
Other associations ..................................................... : See reaction table below.

In WormPaths (?) Pathway maps where this metabolite is represented are listed here.

Letters after map name indicate the compartments the metabolite is placed in the map:

(c) Cytosol
(m) Mitochondria
(e) Extracellular space ..................................................... 		: Glycine and threonine metabolism (c,m)
Comments
  • Formula and charge based on MetaCyc.

    • Reactions
    ID Enzyme Reactants Products Genes (?) Multiple genes are separated by OR (I) or AND (&).

    I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
    & indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

    If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.     		Pathway
    RM03451Name: trimethyllysine dioxygenase
    Type: Regular
    Location: Mitochondria
    KEGG ID: R03451

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    1.14.11.8Name: trimethyllysine dioxygenase
    Other names: trimethyllysine alpha-ketoglutarate dioxygenase, TML-alpha-ketoglutarate dioxygenase, TML hydroxylase, 6-N,6-N,6-N-trimethyl-L-lysine,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating)

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    [m] : akgName: 2-Oxoglutarate
    Formula: C5H4O5
    Charge: -2




    click to see details on this item     + o2Name: O2
    Formula: O2
    Charge: 0




    click to see details on this item     + tmlysName: N6,N6,N6-Trimethyl-L-lysine
    Formula: C9H21N2O2
    Charge: 1




    click to see details on this item
    3htmelysName: 3-Hydroxy-N6,N6,N6-trimethyl-L-lysine
    Formula: C9H21N2O3
    Charge: 1




    click to see details on this item     + co2Name: CO2
    Formula: CO2
    Charge: 0




    click to see details on this item     + succName: Succinate
    Formula: C4H4O4
    Charge: -2




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    gbh-2
    Carnitine biosynthesis
    RC03284Name: 3-hydroxy-6-N-trimethyllysine aldolase
    Type: Regular
    Location: Cytosol
    KEGG ID: R03284

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    4.1.2.-Name: 3-hydroxy-6-N-trimethyllysine aldolase

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    [c] : 3htmelysName: 3-Hydroxy-N6,N6,N6-trimethyl-L-lysine
    Formula: C9H21N2O3
    Charge: 1




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    4tmeabutName: 4-Trimethylammoniobutanal
    Formula: C7H16NO
    Charge: 1




    click to see details on this item     + glyName: Glycine
    Formula: C2H5NO2
    Charge: 0




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    Unknown
    Glycine and threonine metabolism
    TCM5065Name: 3-hydroxy trimethyl lysine transport from mitochondria
    Type: Transport
    Location: Cytosol, Mitochondria
    KEGG ID: NA

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    Not applicable
    3htmelysName: 3-Hydroxy-N6,N6,N6-trimethyl-L-lysine
    Formula: C9H21N2O3
    Charge: 1




    click to see details on this item    [c]
    3htmelysName: 3-Hydroxy-N6,N6,N6-trimethyl-L-lysine
    Formula: C9H21N2O3
    Charge: 1




    click to see details on this item    [m]
    To be determined
    Transport
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