WormFlux: mechanistic analysis of C. elegans metabolism

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? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
* : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.

Network Biomass WormPaths

FBAFlux Balance Analysis PEAPathway Enrichment Analysis

WormClustClustering- and enrichment-based association of genes with the metabolic network

Metabolite Overview

Abbreviation .....................................................	:	abt
Name .....................................................	:	L-Arabinitol, etc.L-Arabitol, L-Arabinol, L-Lyxitol
Model ID .....................................................	:	C00532
KEGG ID (?) Compounds in KEGG database that match this compound. .....................................................	:	C00532
Formula .....................................................	:	C5H12O5
Charge .....................................................	:	0
Localization .....................................................	:	Cytosol, Extracellular
BiGG matches (?) Compounds in BiGG database that match this compound. .....................................................	:	abt
Other associations .....................................................	:	See reaction table below.

In WormPaths (?) Pathway maps where this metabolite is represented are listed here. Letters after map name indicate the compartments the metabolite is placed in the map: (c) Cytosol (m) Mitochondria (e) Extracellular space .....................................................	:	Pentose and glucuronate interconversions (c)

iCEL1314

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Reactions

ID

Enzyme

Reactants

Products

Genes (?) Multiple genes are separated by OR (I) or AND (&).

I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
& indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.

Pathway

RC01758Name: L-Arabitol:NAD+ 1-oxidoreductase Type: Regular Location: Cytosol KEGG ID: R01758 click to see details on this item	1.1.1.21Name: aldehyde reductase Other names: aldose reductase, polyol dehydrogenase (NADP+), ALR2, alditol:NADP+ oxidoreductase, alditol:NADP+ 1-oxidoreductase, NADPH-aldopentose reductase, NADPH-aldose reductase click to see details on this item	[c] : arab-LName: L-Arabinose Formula: C5H10O5 Charge: 0 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item + nadhName: Nicotinamide adenine dinucleotide - reduced Formula: C21H27N7O14P2 Charge: -2 click to see details on this item		abtName: L-Arabinitol Formula: C5H12O5 Charge: 0 click to see details on this item + nadName: Nicotinamide adenine dinucleotide Formula: C21H26N7O14P2 Charge: -1 click to see details on this item	Y39G8B.1	Pentose and glucuronate interconversions
RC01759Name: L-Arabitol:NADP+ 1-oxidoreductase Type: Regular Location: Cytosol KEGG ID: R01759 click to see details on this item	1.1.1.21Name: aldehyde reductase Other names: aldose reductase, polyol dehydrogenase (NADP+), ALR2, alditol:NADP+ oxidoreductase, alditol:NADP+ 1-oxidoreductase, NADPH-aldopentose reductase, NADPH-aldose reductase click to see details on this item	[c] : arab-LName: L-Arabinose Formula: C5H10O5 Charge: 0 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item + nadphName: Nicotinamide adenine dinucleotide phosphate - reduced Formula: C21H26N7O17P3 Charge: -4 click to see details on this item		abtName: L-Arabinitol Formula: C5H12O5 Charge: 0 click to see details on this item + nadpName: Nicotinamide adenine dinucleotide phosphate Formula: C21H25N7O17P3 Charge: -3 click to see details on this item	Y39G8B.1	Pentose and glucuronate interconversions
RC01903Name: L-arabinitol 4-dehydrogenase Type: Regular Location: Cytosol KEGG ID: R01903 click to see details on this item	1.1.1.12Name: L-arabinitol 4-dehydrogenase Other names: pentitol-DPN dehydrogenase (ambiguous), L-arabitol dehydrogenase click to see details on this item	[c] : abtName: L-Arabinitol Formula: C5H12O5 Charge: 0 click to see details on this item + nadName: Nicotinamide adenine dinucleotide Formula: C21H26N7O14P2 Charge: -1 click to see details on this item		hName: H+ Formula: H Charge: 1 click to see details on this item + nadhName: Nicotinamide adenine dinucleotide - reduced Formula: C21H27N7O14P2 Charge: -2 click to see details on this item + xylu-LName: L-Xylulose Formula: C5H10O5 Charge: 0 click to see details on this item	Unknown	Pentose and glucuronate interconversions
TCE1179Name: L-Arabinitol transport Type: Transport Location: Cytosol, Extracellular KEGG ID: NA click to see details on this item	Not applicable	abtName: L-Arabinitol Formula: C5H12O5 Charge: 0 click to see details on this item[e]		abtName: L-Arabinitol Formula: C5H12O5 Charge: 0 click to see details on this item[c]	Not determined	Transport
EX00532Name: L-Arabinitol exchange Type: Exchange Location: Extracellular KEGG ID: NA click to see details on this item	Not applicable	abtName: L-Arabinitol Formula: C5H12O5 Charge: 0 click to see details on this item[e]			Not applicable	Exchange with the environment

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