WormFlux: mechanistic analysis of C. elegans metabolism

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Use wild characters " ? " and " * " for efficient search:

? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
* : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.

Network Biomass WormPaths

PEAPathway Enrichment Analysis

WormClustClustering- and enrichment-based association of genes with the metabolic network WPSWorm Perturb-Seq portal

Metabolite Overview

Abbreviation .....................................................	:	gcald
Name .....................................................	:	Glycolaldehyde, etc.Hydroxyacetaldehyde
Model ID .....................................................	:	C00266
KEGG ID (?) Compounds in KEGG database that match this compound. .....................................................	:	C00266
Formula .....................................................	:	C2H4O2
Charge .....................................................	:	0
Localization .....................................................	:	Mitochondria, Cytosol, Extracellular
BiGG matches (?) Compounds in BiGG database that match this compound. .....................................................	:	gcald
Other associations .....................................................	:	See reaction table below.

In WormPaths (?) Pathway maps where this metabolite is represented are listed here. Letters after map name indicate the compartments the metabolite is placed in the map: (c) Cytosol (m) Mitochondria (e) Extracellular space .....................................................	:	Not yet represented in WormPaths maps.

iCEL1314

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Reactions

ID

Enzyme

Reactants

Products

Genes (?) Multiple genes are separated by OR (I) or AND (&).

I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
& indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.

Pathway

RC01393Name: hydroxypyruvate decarboxylase Type: Regular Location: Cytosol KEGG ID: R01393 click to see details on this item	4.1.1.40Name: hydroxypyruvate decarboxylase Other names: hydroxypyruvate carboxy-lyase click to see details on this item	[c] : hName: H+ Formula: H Charge: 1 click to see details on this item + hpyrName: Hydroxypyruvate Formula: C3H3O4 Charge: -1 click to see details on this item		co2Name: CO2 Formula: CO2 Charge: 0 click to see details on this item + gcaldName: Glycolaldehyde Formula: C2H4O2 Charge: 0 click to see details on this item	Unknown	Miscellaneous
RM01393Name: hydroxypyruvate decarboxylase Type: Regular Location: Mitochondria KEGG ID: R01393 click to see details on this item	4.1.1.40Name: hydroxypyruvate decarboxylase Other names: hydroxypyruvate carboxy-lyase click to see details on this item	[m] : hName: H+ Formula: H Charge: 1 click to see details on this item + hpyrName: Hydroxypyruvate Formula: C3H3O4 Charge: -1 click to see details on this item		co2Name: CO2 Formula: CO2 Charge: 0 click to see details on this item + gcaldName: Glycolaldehyde Formula: C2H4O2 Charge: 0 click to see details on this item	Unknown	Miscellaneous
TCE1204Name: Glycolaldehyde transport Type: Transport Location: Cytosol, Extracellular KEGG ID: NA click to see details on this item	Not applicable	gcaldName: Glycolaldehyde Formula: C2H4O2 Charge: 0 click to see details on this item[e]		gcaldName: Glycolaldehyde Formula: C2H4O2 Charge: 0 click to see details on this item[c]	Not determined	Transport
TCM1062Name: Glycolaldehyde transport Type: Transport Location: Mitochondria, Cytosol KEGG ID: NA click to see details on this item	Not applicable	gcaldName: Glycolaldehyde Formula: C2H4O2 Charge: 0 click to see details on this item[c]		gcaldName: Glycolaldehyde Formula: C2H4O2 Charge: 0 click to see details on this item[m]	Not determined	Transport
EX00266Name: Glycolaldehyde exchange Type: Exchange Location: Extracellular KEGG ID: NA click to see details on this item	Not applicable	gcaldName: Glycolaldehyde Formula: C2H4O2 Charge: 0 click to see details on this item[e]			Not applicable	Exchange with the environment

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