Network Biomass WormPaths

FBAFlux Balance Analysis PEAPathway Enrichment Analysis

WormClustClustering- and enrichment-based association of genes with the metabolic network

Metabolite Overview

Abbreviation .....................................................	:	protSgerCmet
Name .....................................................	:	Protein C-terminal S-geranylgeranyl-L-cysteine methyl ester
Model ID .....................................................	:	CC0018
KEGG ID (?) Compounds in KEGG database that match this compound. .....................................................	:	Not available
Formula .....................................................	:	C26H43N2O3SR(C2H2NOR)n
Charge .....................................................	:	0
Localization .....................................................	:	Cytosol
BiGG matches (?) Compounds in BiGG database that match this compound. .....................................................	:	Not available
Other associations .....................................................	:	See reaction table below.
In WormPaths (?) Pathway maps where this metabolite is represented are listed here. Letters after map name indicate the compartments the metabolite is placed in the map: (c) Cytosol (m) Mitochondria (e) Extracellular space .....................................................	:	Not yet represented in WormPaths maps.

iCEL1314

Comments

Reactions

ID

Enzyme

Reactants

Products

Genes (?) Multiple genes are separated by OR (I) or AND (&). I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme). & indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme). If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.

Pathway

RCC0034Name: S-Adenosyl-L-methionine:protein-C-terminal-S-geranylgeranyl-L-cysteine O-methyltransferase Type: Regular Location: Cytosol KEGG ID: NA click to see details on this item	2.1.1.100Name: protein-S-isoprenylcysteine O-methyltransferase Other names: farnesyl cysteine C-terminal methyltransferase, farnesyl-protein carboxymethyltransferase, protein C-terminal farnesylcysteine O-methyltransferase, farnesylated protein C-terminal O-methyltransferase, isoprenylated protein methyltransferase, prenylated protein methyltransferase, protein S-farnesylcysteine C-terminal methyltransferase, S-farnesylcysteine methyltransferase, prenylcysteine carboxylmethyltransferase [misleading], prenylcysteine carboxymethyltransferase [misleading], prenylcysteine methyltransferase click to see details on this item	[c] : ametName: S-Adenosyl-L-methionine Formula: C15H23N6O5S Charge: 1 click to see details on this item + protSgerCName: Protein C-terminal S-geranylgeranyl-L-cysteine Formula: C25H41N2O3SR(C2H2NOR)n Charge: 0 click to see details on this item		ahcysName: S-Adenosyl-L-homocysteine Formula: C14H20N6O5S Charge: 0 click to see details on this item + protSgerCmetName: Protein C-terminal S-geranylgeranyl-L-cysteine methyl ester Formula: C26H43N2O3SR(C2H2NOR)n Charge: 0 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item	icmt-1 | M01E11.1	Miscellaneous
BIO0015Name: Assembly of minor components of biomass Type: Biomass Location: Cytosol, Mitochondria KEGG ID: NA click to see details on this item	Not applicable	protSfarName: S-Farnesyl protein Formula: C20H33N2O3SR(C2H2NOR)n(C2H2NOR)n Charge: 0 click to see details on this item[c] + protSgerCName: Protein C-terminal S-geranylgeranyl-L-cysteine Formula: C25H41N2O3SR(C2H2NOR)n Charge: 0 click to see details on this item[c] + hemeproteinName: Hemeprotein Formula: C34H30FeN4O4X Charge: 0 click to see details on this item[c] + protSfarCmetName: Protein C-terminal S-farnesyl-L-cysteine methyl ester Formula: C21H35N2O3SR(C2H2NOR)n Charge: 0 click to see details on this item[c] + protSgerName: S-geranylgeranyl protein Formula: C25H41N2O3SR(C2H2NOR)n(C2H2NOR)n Charge: 0 click to see details on this item[c] + (4.0) pepdName: Peptide Formula: C2H4NO2R(C2H2NOR)n Charge: 0 click to see details on this item[c] + protSfarCName: Protein C-terminal S-farnesyl-L-cysteine Formula: C20H33N2O3SR(C2H2NOR)n Charge: 0 click to see details on this item[c] + focytCName: Ferrocytochrome C Formula: C42H42FeN8O8S2R4 Charge: 0 click to see details on this item[m] + protSgerCmetName: Protein C-terminal S-geranylgeranyl-L-cysteine methyl ester Formula: C26H43N2O3SR(C2H2NOR)n Charge: 0 click to see details on this item[c] + ISclustprotName: Iron-sulfur cluster protein Formula: XFe2S2 Charge: 6 click to see details on this item[m]		biomass_minorName: Minor components of biomass Formula: X Charge: 0 click to see details on this item[c] + apoISclustprotName: apo iron-sulfur cluster protein Formula: X Charge: 0 click to see details on this item[m] + apocytcName: Apo cytochrome C Formula: C8H12N4O4S2R4 Charge: 0 click to see details on this item[m] + apohemeproteinName: Apohemeprotein Formula: X Charge: 0 click to see details on this item[c] + (6.0) protCysName: Protein-cysteine Formula: C5H9N2O3SR(C2H2NOR)n(C2H2NOR)n Charge: 0 click to see details on this item[c]	Not applicable	Biomass assembly

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