HOME DOWNLOAD CITATION HELP
Umass Logo PSB Logo
(?) Enter a search word or phrase (left box), optionally select an appropriate field (middle), and hit the search button or press enter. This search engine is NOT case sensitive.

Use wild characters " ? " and " * " for efficient search:
  • ? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
  • * : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.
Network Biomass WormPaths
FBAFlux Balance Analysis PEAPathway Enrichment Analysis
WormClustClustering- and enrichment-based association of genes with the metabolic network
Metabolite Overview
Abbreviation ..................................................... : dedoldp
Name ..................................................... : Dehydrodolichol diphosphate, n=18, etc.Dehydrodolichol diphosphate, Dehydrodolichyl diphosphate, ditrans,polycis-Polyprenyl diphosphate
Model ID ..................................................... : C05859
KEGG ID (?) Compounds in KEGG database that match this compound. ..................................................... : C05859
Formula ..................................................... : C110H177O7P2
Charge ..................................................... : -3
Localization ..................................................... : Cytosol
BiGG matches (?) Compounds in BiGG database that match this compound. ..................................................... : dedoldp_L, dedoldp_U
Other associations ..................................................... : See reaction table below.

In WormPaths (?) Pathway maps where this metabolite is represented are listed here.

Letters after map name indicate the compartments the metabolite is placed in the map:

(c) Cytosol
(m) Mitochondria
(e) Extracellular space ..................................................... 		: Mevalonate metabolism (c), N-Glycan biosynthesis (c)
Comments
  • Assumed n=18 for the number of isoprene units.
  • Charge of this molecule comes from the PP group only.

    • Reactions
    ID Enzyme Reactants Products Genes (?) Multiple genes are separated by OR (I) or AND (&).

    I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
    & indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

    If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.     		Pathway
    RCC0029Name: dehydrodolichol diphosphate phosphatase
    Type: Regular
    Location: Cytosol
    KEGG ID: NA

    click to see details on this item
    Unknown
    [c] : dedoldpName: Dehydrodolichol diphosphate, n=18
    Formula: C110H177O7P2
    Charge: -3




    click to see details on this item     + h2oName: H2O
    Formula: H2O
    Charge: 0




    click to see details on this item
    dedolpName: Dehydrodolichol phosphate, n=18
    Formula: C110H177O4P1
    Charge: -2




    click to see details on this item     + hName: H+
    Formula: H
    Charge: 1




    click to see details on this item     + piName: Phosphate
    Formula: HO4P
    Charge: -2




    click to see details on this item
    Unknown
    N-Glycan biosynthesis
    RC05556Name: (2E,6E)-farnesyl-diphosphate:isopentenyl-diphosphate cistransferase (adding 10-55 isopentenyl units)
    Type: Regular
    Location: Cytosol
    KEGG ID: R05556

    click to see details on this item
    2.5.1.87Name: ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific]
    Other names: RER2, Rer2p, Rer2p Z-prenyltransferase, Srt1p, Srt2p Z-prenyltransferase, ACPT, dehydrodolichyl diphosphate synthase 1

    click to see details on this item
    [c] : frdpName: Farnesyl diphosphate
    Formula: C15H25O7P2
    Charge: -3




    click to see details on this item     + (19) ipdpName: Isopentenyl diphosphate
    Formula: C5H9O7P2
    Charge: -3




    click to see details on this item
    dedoldpName: Dehydrodolichol diphosphate, n=18
    Formula: C110H177O7P2
    Charge: -3




    click to see details on this item     + (19) ppiName: Diphosphate
    Formula: HO7P2
    Charge: -3




    click to see details on this item
    T01G1.4
    Mevalonate metabolism
    The information and tools provided in this website are to be used for academic purposes only.