Network Biomass WormPaths

FBAFlux Balance Analysis PEAPathway Enrichment Analysis

WormClustClustering- and enrichment-based association of genes with the metabolic network

Metabolite Overview

Abbreviation .....................................................	:	2mb2coa
Name .....................................................	:	trans-2-Methylbut-2-enoyl-CoA, etc.2-Methylbut-2-enoyl-CoA, Tiglyl-CoA, (E)-2-Methylcrotonoyl-CoA, Methylcrotonoyl-CoA, Methylcrotonyl-CoA, Tigloyl-CoA, 2-Methylcrotanoyl-CoA
Model ID .....................................................	:	C03345
KEGG ID (?) Compounds in KEGG database that match this compound. .....................................................	:	C03345
Formula .....................................................	:	C26H38N7O17P3S
Charge .....................................................	:	-4
Localization .....................................................	:	Mitochondria
BiGG matches (?) Compounds in BiGG database that match this compound. .....................................................	:	2mb2coa
Other associations .....................................................	:	See reaction table below.
In WormPaths (?) Pathway maps where this metabolite is represented are listed here. Letters after map name indicate the compartments the metabolite is placed in the map: (c) Cytosol (m) Mitochondria (e) Extracellular space .....................................................	:	Isoleucine degradation (m)

iCEL1314

Reactions

ID

Enzyme

Reactants

Products

Genes (?) Multiple genes are separated by OR (I) or AND (&). I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme). & indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme). If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.

Pathway

RM03172Name: (S)-2-methylbutanoyl-CoA:acceptor 2,3-oxidoreductase Type: Regular Location: Mitochondria KEGG ID: R03172 click to see details on this item	1.3.99.12Name: 2-methylacyl-CoA dehydrogenase Other names: branched-chain acyl-CoA dehydrogenase, 2-methyl branched chain acyl-CoA dehydrogenase, 2-methylbutanoyl-CoA:(acceptor) oxidoreductase click to see details on this item 1.3.8.1Name: short-chain acyl-CoA dehydrogenase Other names: butyryl-CoA dehydrogenase, butanoyl-CoA dehydrogenase, butyryl dehydrogenase, unsaturated acyl-CoA reductase, ethylene reductase, enoyl-coenzyme A reductase, unsaturated acyl coenzyme A reductase, butyryl coenzyme A dehydrogenase, short-chain acyl CoA dehydrogenase, short-chain acyl-coenzyme A dehydrogenase, 3-hydroxyacyl CoA reductase, butanoyl-CoA:(acceptor) 2,3-oxidoreductase, ACADS (gene name). click to see details on this item	[m] : 2mbcoaName: 2-Methylbutanoyl-CoA Formula: C26H40N7O17P3S Charge: -4 click to see details on this item + etfoxName: Electron transfer flavoprotein oxidized Formula: R Charge: 0 click to see details on this item		2mb2coaName: trans-2-Methylbut-2-enoyl-CoA Formula: C26H38N7O17P3S Charge: -4 click to see details on this item + etfrdName: Electron transfer flavoprotein reduced Formula: RH2 Charge: 0 click to see details on this item	acdh-1 | acdh-2 | acdh-3	Isoleucine degradation
RM04204Name: (2S,3S)-3-Hydroxy-2-methylbutanoyl-CoA hydro-liase Type: Regular Location: Mitochondria KEGG ID: R04204 click to see details on this item	4.2.1.17Name: enoyl-CoA hydratase Other names: enoyl hydrase, unsaturated acyl-CoA hydratase, beta-hydroxyacyl-CoA dehydrase, beta-hydroxyacid dehydrase, hydratase, enoyl coenzyme A, acyl coenzyme A hydrase, crotonase, crotonyl hydrase, 2-octenoyl coenzyme A hydrase, enoyl coenzyme A hydratase, 2-enoyl-CoA hydratase, short-chain enoyl-CoA hydratase, ECH, trans-2-enoyl-CoA hydratase, enoyl coenzyme A hydrase (D), enoyl coenzyme A hydrase (L), short chain enoyl coenzyme A hydratase, D-3-hydroxyacyl-CoA dehydratase, enol-CoA hydratase click to see details on this item	[m] : 2mb2coaName: trans-2-Methylbut-2-enoyl-CoA Formula: C26H38N7O17P3S Charge: -4 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item		3hmbcoaName: (S)-3-Hydroxy-2-methylbutyryl-CoA Formula: C26H40N7O18P3S Charge: -4 click to see details on this item	(ech-6 | ech-7) | (ech-1.2 | ech-1.1) | ech-3	Isoleucine degradation

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