WormFlux: mechanistic analysis of C. elegans metabolism

HOME DOWNLOAD CITATION HELP

(?) Enter a search word or phrase (left box), optionally select an appropriate field (middle), and hit the search button or press enter. This search engine is NOT case sensitive.

Use wild characters " ? " and " * " for efficient search:

? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
* : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.

Network Biomass WormPaths

FBAFlux Balance Analysis PEAPathway Enrichment Analysis

WormClustClustering- and enrichment-based association of genes with the metabolic network

Metabolite Overview

Abbreviation .....................................................	:	35diotyr
Name .....................................................	:	"3,5-Diiodo-L-tyrosine", etc.3,5-Diiodo-L-tyrosine, 3,5-Diiodotyrosine, L-Diiodotyrosine
Model ID .....................................................	:	C01060
KEGG ID (?) Compounds in KEGG database that match this compound. .....................................................	:	C01060
Formula .....................................................	:	C9H9I2NO3
Charge .....................................................	:	0
Localization .....................................................	:	Cytosol, Extracellular
BiGG matches (?) Compounds in BiGG database that match this compound. .....................................................	:	35diotyr
Other associations .....................................................	:	See reaction table below.

In WormPaths (?) Pathway maps where this metabolite is represented are listed here. Letters after map name indicate the compartments the metabolite is placed in the map: (c) Cytosol (m) Mitochondria (e) Extracellular space .....................................................	:	Tyrosine metabolism (c,e)

iCEL1314

Comments

ERROR

Reactions

ID

Enzyme

Reactants

Products

Genes (?) Multiple genes are separated by OR (I) or AND (&).

I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
& indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.

Pathway

RC10059Name: NADP+:L-tyrosine oxidoreductase (iodinating) Type: Regular Location: Cytosol KEGG ID: R10059 click to see details on this item	1.22.1.1Name: iodotyrosine deiodinase Other names: iodotyrosine dehalogenase 1, DEHAL1 click to see details on this item	[c] : tyr-LName: L-Tyrosine Formula: C9H11NO3 Charge: 0 click to see details on this item + (2.0) nadpName: Nicotinamide adenine dinucleotide phosphate Formula: C21H25N7O17P3 Charge: -3 click to see details on this item + (2.0) iName: Iodide Formula: I Charge: -1 click to see details on this item		35diotyrName: "3,5-Diiodo-L-tyrosine" Formula: C9H9I2NO3 Charge: 0 click to see details on this item + (2.0) nadphName: Nicotinamide adenine dinucleotide phosphate - reduced Formula: C21H26N7O17P3 Charge: -4 click to see details on this item	sup-18	Tyrosine metabolism
DMN1001Name: Diiodotyrosine demand Type: Demand Location: Cytosol KEGG ID: NA click to see details on this item	Not applicable	35diotyrName: "3,5-Diiodo-L-tyrosine" Formula: C9H9I2NO3 Charge: 0 click to see details on this item[c]			Not applicable	Demand reactions
TCE5306Name: 3,5-Diiodo-L-tyrosine transport Type: Transport Location: Cytosol, Extracellular KEGG ID: NA click to see details on this item	Not applicable	35diotyrName: "3,5-Diiodo-L-tyrosine" Formula: C9H9I2NO3 Charge: 0 click to see details on this item[c] + na1Name: Sodium Formula: Na Charge: 1 click to see details on this item[e]		35diotyrName: "3,5-Diiodo-L-tyrosine" Formula: C9H9I2NO3 Charge: 0 click to see details on this item[e] + na1Name: Sodium Formula: Na Charge: 1 click to see details on this item[c]	Not determined	Transport
EX01060Name: "3,5-Diiodo-L-tyrosine" exchange Type: Exchange Location: Extracellular KEGG ID: NA click to see details on this item	Not applicable	35diotyrName: "3,5-Diiodo-L-tyrosine" Formula: C9H9I2NO3 Charge: 0 click to see details on this item[e]			Not applicable	Exchange with the environment

The information and tools provided in this website are to be used for academic purposes only.