Network Biomass WormPaths

FBAFlux Balance Analysis PEAPathway Enrichment Analysis

WormClustClustering- and enrichment-based association of genes with the metabolic network

Metabolite Overview

Abbreviation .....................................................	:	T4hcinnm
Name .....................................................	:	trans-4-Hydroxycinnamate, etc.4-Coumarate, p-Coumaric acid, trans-p-Hydroxycinnamate, 4-Hydroxycinnamic acid, 4-Hydroxycinnamate
Model ID .....................................................	:	C00811
KEGG ID (?) Compounds in KEGG database that match this compound. .....................................................	:	C00811
Formula .....................................................	:	C9H7O3
Charge .....................................................	:	-1
Localization .....................................................	:	Mitochondria, Cytosol, Extracellular
BiGG matches (?) Compounds in BiGG database that match this compound. .....................................................	:	T4hcinnm
Other associations .....................................................	:	See reaction table below (6 reactions in total)
In WormPaths (?) Pathway maps where this metabolite is represented are listed here. Letters after map name indicate the compartments the metabolite is placed in the map: (c) Cytosol (m) Mitochondria (e) Extracellular space .....................................................	:	Ubiquinone metabolism (c,e,m)

iCEL1314

Reactions

ID

Enzyme

Reactants

Products

Genes (?) Multiple genes are separated by OR (I) or AND (&). I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme). & indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme). If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.

Pathway

RM08766Name: 3-(4-hydroxyphenyl)lactate hydro-lyase (4-coumarate-forming) Type: Regular Location: Mitochondria KEGG ID: R08766 click to see details on this item	4.2.1.-Name: 3-(4-hydroxyphenyl)lactate hydro-lyase (4-coumarate-forming) Other names: 3-(4-hydroxyphenyl)lactate hydro-lyase (4-coumarate-forming) click to see details on this item	[m] : 34hplName: 3-(4-Hydroxyphenyl)lactate Formula: C9H9O4 Charge: -1 click to see details on this item		T4hcinnmName: trans-4-Hydroxycinnamate Formula: C9H7O3 Charge: -1 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item	Unknown	Ubiquinone metabolism
RM01616Name: 4-Coumarate:CoA ligase (AMP-forming) Type: Regular Location: Mitochondria KEGG ID: R01616 click to see details on this item	6.2.1.12Name: 4-coumarate---CoA ligase Other names: 4-coumaroyl-CoA synthetase, p-coumaroyl CoA ligase, p-coumaryl coenzyme A synthetase, p-coumaryl-CoA synthetase, p-coumaryl-CoA ligase, feruloyl CoA ligase, hydroxycinnamoyl CoA synthetase, 4-coumarate:coenzyme A ligase, caffeolyl coenzyme A synthetase, p-hydroxycinnamoyl coenzyme A synthetase, feruloyl coenzyme A synthetase, sinapoyl coenzyme A synthetase, 4-coumaryl-CoA synthetase, hydroxycinnamate:CoA ligase, p-coumaryl-CoA ligase, p-hydroxycinnamic acid:CoA ligase, 4CL click to see details on this item	[m] : T4hcinnmName: trans-4-Hydroxycinnamate Formula: C9H7O3 Charge: -1 click to see details on this item + atpName: ATP Formula: C10H12N5O13P3 Charge: -4 click to see details on this item + coaName: Coenzyme A Formula: C21H32N7O16P3S Charge: -4 click to see details on this item		4cmcoaName: 4-Coumaroyl-CoA Formula: C30H38N7O18P3S Charge: -4 click to see details on this item + ampName: AMP Formula: C10H12N5O7P Charge: -2 click to see details on this item + ppiName: Diphosphate Formula: HO7P2 Charge: -3 click to see details on this item	acs-6	Ubiquinone metabolism
RC08766Name: 3-(4-hydroxyphenyl)lactate hydro-lyase (4-coumarate-forming) Type: Regular Location: Cytosol KEGG ID: R08766 click to see details on this item	4.2.1.-Name: 3-(4-hydroxyphenyl)lactate hydro-lyase (4-coumarate-forming) Other names: 3-(4-hydroxyphenyl)lactate hydro-lyase (4-coumarate-forming) click to see details on this item	[c] : 34hplName: 3-(4-Hydroxyphenyl)lactate Formula: C9H9O4 Charge: -1 click to see details on this item		T4hcinnmName: trans-4-Hydroxycinnamate Formula: C9H7O3 Charge: -1 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item	Unknown	Ubiquinone metabolism
RC01616Name: 4-Coumarate:CoA ligase (AMP-forming) Type: Regular Location: Cytosol KEGG ID: R01616 click to see details on this item	6.2.1.12Name: 4-coumarate---CoA ligase Other names: 4-coumaroyl-CoA synthetase, p-coumaroyl CoA ligase, p-coumaryl coenzyme A synthetase, p-coumaryl-CoA synthetase, p-coumaryl-CoA ligase, feruloyl CoA ligase, hydroxycinnamoyl CoA synthetase, 4-coumarate:coenzyme A ligase, caffeolyl coenzyme A synthetase, p-hydroxycinnamoyl coenzyme A synthetase, feruloyl coenzyme A synthetase, sinapoyl coenzyme A synthetase, 4-coumaryl-CoA synthetase, hydroxycinnamate:CoA ligase, p-coumaryl-CoA ligase, p-hydroxycinnamic acid:CoA ligase, 4CL click to see details on this item	[c] : T4hcinnmName: trans-4-Hydroxycinnamate Formula: C9H7O3 Charge: -1 click to see details on this item + atpName: ATP Formula: C10H12N5O13P3 Charge: -4 click to see details on this item + coaName: Coenzyme A Formula: C21H32N7O16P3S Charge: -4 click to see details on this item		4cmcoaName: 4-Coumaroyl-CoA Formula: C30H38N7O18P3S Charge: -4 click to see details on this item + ampName: AMP Formula: C10H12N5O7P Charge: -2 click to see details on this item + ppiName: Diphosphate Formula: HO7P2 Charge: -3 click to see details on this item	acs-6 | acs-14	Ubiquinone metabolism
TCE5344Name: trans-4-Hydroxycinnamate transport Type: Transport Location: Cytosol, Extracellular KEGG ID: NA click to see details on this item	Not applicable	oh1Name: hydroxide ion Formula: HO Charge: -1 click to see details on this item[e] + T4hcinnmName: trans-4-Hydroxycinnamate Formula: C9H7O3 Charge: -1 click to see details on this item[c]		oh1Name: hydroxide ion Formula: HO Charge: -1 click to see details on this item[c] + T4hcinnmName: trans-4-Hydroxycinnamate Formula: C9H7O3 Charge: -1 click to see details on this item[e]	Not determined	Transport
EX00811Name: trans-4-Hydroxycinnamate exchange Type: Exchange Location: Extracellular KEGG ID: NA click to see details on this item	Not applicable	T4hcinnmName: trans-4-Hydroxycinnamate Formula: C9H7O3 Charge: -1 click to see details on this item[e]			Not applicable	Exchange with the environment

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