WormFlux: mechanistic analysis of C. elegans metabolism

HOME DOWNLOAD CITATION HELP

(?) Enter a search word or phrase (left box), optionally select an appropriate field (middle), and hit the search button or press enter. This search engine is NOT case sensitive.

Use wild characters " ? " and " * " for efficient search:

? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
* : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.

Network Biomass WormPaths

PEAPathway Enrichment Analysis

WormClustClustering- and enrichment-based association of genes with the metabolic network WPSWorm Perturb-Seq portal

Metabolite Overview

Abbreviation .....................................................	:	cbasp
Name .....................................................	:	N-Carbamoyl-L-aspartate
Model ID .....................................................	:	C00438
KEGG ID (?) Compounds in KEGG database that match this compound. .....................................................	:	C00438
Formula .....................................................	:	C5H6N2O5
Charge .....................................................	:	-2
Localization .....................................................	:	Cytosol, Extracellular
BiGG matches (?) Compounds in BiGG database that match this compound. .....................................................	:	cbasp
Other associations .....................................................	:	See reaction table below.

In WormPaths (?) Pathway maps where this metabolite is represented are listed here. Letters after map name indicate the compartments the metabolite is placed in the map: (c) Cytosol (m) Mitochondria (e) Extracellular space .....................................................	:	Aspartate and asparagine metabolism (c), Pyrimidine metabolism (c)

iCEL1314

Comments

ERROR

Reactions

ID

Enzyme

Reactants

Products

Genes (?) Multiple genes are separated by OR (I) or AND (&).

I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
& indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.

Pathway

RC01397Name: carbamoyl-phosphate:L-aspartate carbamoyltransferase Type: Regular Location: Cytosol KEGG ID: R01397 click to see details on this item	2.1.3.2Name: aspartate carbamoyltransferase Other names: carbamylaspartotranskinase, aspartate transcarbamylase, aspartate carbamyltransferase, aspartic acid transcarbamoylase, aspartic carbamyltransferase, aspartic transcarbamylase, carbamylaspartotranskinase, L-aspartate transcarbamoylase, L-aspartate transcarbamylase, carbamoylaspartotranskinase, aspartate transcarbamylase, aspartate transcarbamoylase, ATCase click to see details on this item	[c] : asp-LName: L-Aspartate Formula: C4H6NO4 Charge: -1 click to see details on this item + cbpName: Carbamoyl phosphate Formula: CH2NO5P Charge: -2 click to see details on this item		cbaspName: N-Carbamoyl-L-aspartate Formula: C5H6N2O5 Charge: -2 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item + piName: Phosphate Formula: HO4P Charge: -2 click to see details on this item	pyr-1	Aspartate and asparagine metabolism
RC01993Name: (S)-dihydroorotate amidohydrolase Type: Regular Location: Cytosol KEGG ID: R01993 click to see details on this item	3.5.2.3Name: dihydroorotase Other names: carbamoylaspartic dehydrase, dihydroorotate hydrolase click to see details on this item	[c] : dhor-SName: (S)-Dihydroorotate Formula: C5H5N2O4 Charge: -1 click to see details on this item + h2oName: H2O Formula: H2O Charge: 0 click to see details on this item		cbaspName: N-Carbamoyl-L-aspartate Formula: C5H6N2O5 Charge: -2 click to see details on this item + hName: H+ Formula: H Charge: 1 click to see details on this item	pyr-1	Pyrimidine metabolism
TCE5335Name: N-Carbamoyl-L-aspartate transport Type: Transport Location: Cytosol, Extracellular KEGG ID: NA click to see details on this item	Not applicable	cbaspName: N-Carbamoyl-L-aspartate Formula: C5H6N2O5 Charge: -2 click to see details on this item[e]		cbaspName: N-Carbamoyl-L-aspartate Formula: C5H6N2O5 Charge: -2 click to see details on this item[c]	Not determined	Transport
EX00438Name: N-Carbamoyl-L-aspartate exchange Type: Exchange Location: Extracellular KEGG ID: NA click to see details on this item	Not applicable	cbaspName: N-Carbamoyl-L-aspartate Formula: C5H6N2O5 Charge: -2 click to see details on this item[e]			Not applicable	Exchange with the environment

The information and tools provided in this website are to be used for academic purposes only.