WormFlux: mechanistic analysis of C. elegans metabolism

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Use wild characters " ? " and " * " for efficient search:

? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
* : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.

Network Biomass WormPaths

FBAFlux Balance Analysis PEAPathway Enrichment Analysis

WormClustClustering- and enrichment-based association of genes with the metabolic network

Metabolite Overview

Abbreviation .....................................................	:	e4p
Name .....................................................	:	D-Erythrose 4-phosphate
Model ID .....................................................	:	C00279
KEGG ID (?) Compounds in KEGG database that match this compound. .....................................................	:	C00279
Formula .....................................................	:	C4H7O7P
Charge .....................................................	:	-2
Localization .....................................................	:	Mitochondria, Cytosol
BiGG matches (?) Compounds in BiGG database that match this compound. .....................................................	:	e4p
Other associations .....................................................	:	See reaction table below.

In WormPaths (?) Pathway maps where this metabolite is represented are listed here. Letters after map name indicate the compartments the metabolite is placed in the map: (c) Cytosol (m) Mitochondria (e) Extracellular space .....................................................	:	Pentose phosphate pathway (c)

iCEL1314

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Enzyme

Reactants

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Genes (?) Multiple genes are separated by OR (I) or AND (&).

I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
& indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.

Pathway

RC01830Name: beta-D-Fructose 6-phosphate:D-glyceraldehyde-3-phosphate glycolaldehyde transferase Type: Regular Location: Cytosol KEGG ID: R01830 click to see details on this item	2.2.1.1Name: transketolase Other names: glycolaldehydetransferase click to see details on this item	[c] : f6pName: D-Fructose 6-phosphate Formula: C6H11O9P Charge: -2 click to see details on this item + g3pName: Glyceraldehyde 3-phosphate Formula: C3H5O6P Charge: -2 click to see details on this item		e4pName: D-Erythrose 4-phosphate Formula: C4H7O7P Charge: -2 click to see details on this item + xu5p-DName: D-Xylulose 5-phosphate Formula: C5H9O8P Charge: -2 click to see details on this item	tkt-1	Pentose phosphate pathway
RC01827Name: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase Type: Regular Location: Cytosol KEGG ID: R01827 click to see details on this item	2.2.1.2Name: transaldolase Other names: dihydroxyacetonetransferase, dihydroxyacetone synthase, formaldehyde transketolase click to see details on this item	[c] : s7pName: Sedoheptulose 7-phosphate Formula: C7H13O10P Charge: -2 click to see details on this item + g3pName: Glyceraldehyde 3-phosphate Formula: C3H5O6P Charge: -2 click to see details on this item		e4pName: D-Erythrose 4-phosphate Formula: C4H7O7P Charge: -2 click to see details on this item + f6pName: D-Fructose 6-phosphate Formula: C6H11O9P Charge: -2 click to see details on this item	tald-1	Pentose phosphate pathway
RC01829Name: Sedoheptulose 1,7-bisphosphate D-glyceraldehyde-3-phosphate-lyase Type: Regular Location: Cytosol KEGG ID: R01829 click to see details on this item	4.1.2.13Name: fructose-bisphosphate aldolase Other names: aldolase, fructose-1,6-bisphosphate triosephosphate-lyase, fructose diphosphate aldolase, diphosphofructose aldolase, fructose 1,6-diphosphate aldolase, ketose 1-phosphate aldolase, phosphofructoaldolase, zymohexase, fructoaldolase, fructose 1-phosphate aldolase, fructose 1-monophosphate aldolase, 1,6-Diphosphofructose aldolase, SMALDO, D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase click to see details on this item	[c] : s17bpName: "Sedoheptulose 1,7-bisphosphate" Formula: C7H12O13P2 Charge: -4 click to see details on this item		dhapName: Dihydroxyacetone phosphate Formula: C3H5O6P Charge: -2 click to see details on this item + e4pName: D-Erythrose 4-phosphate Formula: C4H7O7P Charge: -2 click to see details on this item	aldo-2 \| aldo-1	Pentose phosphate pathway
TCM1102Name: D-Erythrose 4-phosphate transport Type: Transport Location: Cytosol, Mitochondria KEGG ID: NA click to see details on this item	Not applicable	e4pName: D-Erythrose 4-phosphate Formula: C4H7O7P Charge: -2 click to see details on this item[c]		e4pName: D-Erythrose 4-phosphate Formula: C4H7O7P Charge: -2 click to see details on this item[m]	Not determined	Transport

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