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Use wild characters " ? " and " * " for efficient search:
  • ? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
  • * : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.
Network Biomass WormPaths
PEAPathway Enrichment Analysis
WormClustClustering- and enrichment-based association of genes with the metabolic network WPSWorm Perturb-Seq portal
Metabolite Overview
Abbreviation ..................................................... : Rtotal5
Name ..................................................... : R total 5 position
Model ID ..................................................... : CC0085
KEGG ID (?) Compounds in KEGG database that match this compound. ..................................................... : Not available
Formula ..................................................... : CO2FULLR5
Charge ..................................................... : -1
Localization ..................................................... : Cytosol
BiGG matches (?) Compounds in BiGG database that match this compound. ..................................................... : Rtotal, Rtotal2, Rtotal3
Other associations ..................................................... : See reaction table below.

In WormPaths (?) Pathway maps where this metabolite is represented are listed here.

Letters after map name indicate the compartments the metabolite is placed in the map:

(c) Cytosol
(m) Mitochondria
(e) Extracellular space ..................................................... 		: Glycerolipid metabolism (c)
Comments
  • Charge is based on matching BiGG compounds.

    • Reactions
    ID Enzyme Reactants Products Genes (?) Multiple genes are separated by OR (I) or AND (&).

    I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
    & indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

    If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.     		Pathway
    RCC0152Name: fatty-acid--CoA ligase (Rtotal5)
    Type: Regular
    Location: Cytosol
    KEGG ID: R00390

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    6.2.1.3Name: long-chain-fatty-acid---CoA ligase
    Other names: acyl-CoA synthetase, fatty acid thiokinase (long chain), acyl-activating enzyme, palmitoyl-CoA synthase, lignoceroyl-CoA synthase, arachidonyl-CoA synthetase, acyl coenzyme A synthetase, acyl-CoA ligase, palmitoyl coenzyme A synthetase, thiokinase, palmitoyl-CoA ligase, acyl-coenzyme A ligase, fatty acid CoA ligase, long-chain fatty acyl coenzyme A synthetase, oleoyl-CoA synthetase, stearoyl-CoA synthetase, long chain fatty acyl-CoA synthetase, long-chain acyl CoA synthetase, fatty acid elongase, LCFA synthetase, pristanoyl-CoA synthetase, ACS3, long-chain acyl-CoA synthetase I, long-chain acyl-CoA synthetase II, fatty acyl-coenzyme A synthetase, long-chain acyl-coenzyme A synthetase, FAA1

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    [c] : atpName: ATP
    Formula: C10H12N5O13P3
    Charge: -4




    click to see details on this item     + coaName: Coenzyme A
    Formula: C21H32N7O16P3S
    Charge: -4




    click to see details on this item     + Rtotal5Name: R total 5 position
    Formula: CO2FULLR5
    Charge: -1




    click to see details on this item
    ampName: AMP
    Formula: C10H12N5O7P
    Charge: -2




    click to see details on this item     + ppiName: Diphosphate
    Formula: HO7P2
    Charge: -3




    click to see details on this item     + Rtotal5coaName: R total 5 coenzyme A
    Formula: CO2FULLR5C21H31N7O15P3S
    Charge: -4




    click to see details on this item
    acs-2 | acs-3 | acs-4 | acs-5 | acs-13 | acs-15 | acs-17 | acs-18
    Miscellaneous
    RC02687Name: 1,2-diacyl-sn-glycerol acylhydrolase
    Type: Regular
    Location: Cytosol
    KEGG ID: R02687;R05209

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    3.1.1.3Name: triacylglycerol lipase
    Other names: lipase (ambiguous), butyrinase, tributyrinase, Tween hydrolase, steapsin, triacetinase, tributyrin esterase, Tweenase, amno N-AP, Takedo 1969-4-9, Meito MY 30, Tweenesterase, GA 56, capalase L, triglyceride hydrolase, triolein hydrolase, tween-hydrolyzing esterase, amano CE, cacordase, triglyceridase, triacylglycerol ester hydrolase, amano P, amano AP, PPL, glycerol-ester hydrolase, GEH, meito Sangyo OF lipase, hepatic lipase, lipazin, post-heparin plasma protamine-resistant lipase, salt-resistant post-heparin lipase, heparin releasable hepatic lipase, amano CES, amano B, tributyrase, triglyceride lipase, liver lipase, hepatic monoacylglycerol acyltransferase

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    3.1.1.79Name: hormone-sensitive lipase
    Other names: HSL

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    [c] : dag_tagName: diacylglycerol (TAG)
    Formula: C3H6OFULLR4CO2FULLR5CO2
    Charge: 0




    click to see details on this item     + h2oName: H2O
    Formula: H2O
    Charge: 0




    click to see details on this item
    Rtotal5Name: R total 5 position
    Formula: CO2FULLR5
    Charge: -1




    click to see details on this item     + hName: H+
    Formula: H
    Charge: 1




    click to see details on this item     + magName: monoacylglycerol 2
    Formula: C3H7O2FULLR4CO2
    Charge: 0




    click to see details on this item
    atgl-1 | hosl-1
    Glycerolipid metabolism
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