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(?) Enter a search word or phrase (left box), optionally select an appropriate field (middle), and hit the search button or press enter. This search engine is NOT case sensitive.

Use wild characters " ? " and " * " for efficient search:
  • ? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
  • * : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.
Network Biomass
FBA FVA Integrate expression
Pathway Overview
Name ..................................................... : Bacterial digestion
Related pathway (?) The pathway found in other databases to which this pathway is related. ..................................................... : ERROR
Number of reactions ..................................................... : 31
Reactions (?) Click to see these reactions in the related KEGG pathway (only enzymes that are represented in kegg are highlighted).
ID Enzyme Reactants Products Genes (?) Multiple genes are separated by OR (I) or AND (&).

I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
& indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.
Pathway
Not applicable
(0.096044) ala-LName: L-Alanine
Formula: C3H7NO2
Charge: 0




click to see details on this item
+ (0.055304) arg-LName: L-Arginine
Formula: C6H15N4O2
Charge: 1




click to see details on this item
+ (0.04507) asn-LName: L-Asparagine
Formula: C4H8N2O3
Charge: 0




click to see details on this item
+ (0.04507) asp-LName: L-Aspartate
Formula: C4H6NO4
Charge: -1




click to see details on this item
+ (0.017123) cys-LName: L-Cysteine
Formula: C3H7NO2S
Charge: 0




click to see details on this item
+ (0.049203) glu-LName: L-Glutamate
Formula: C5H8NO4
Charge: -1




click to see details on this item
+ (0.049203) gln-LName: L-Glutamine
Formula: C5H10N2O3
Charge: 0




click to see details on this item
+ (0.114544) glyName: Glycine
Formula: C2H5NO2
Charge: 0




click to see details on this item
+ (0.017713) his-LName: L-Histidine
Formula: C6H9N3O2
Charge: 0




click to see details on this item
+ (0.05432) ile-LName: L-Isoleucine
Formula: C6H13NO2
Charge: 0




click to see details on this item
+ (0.084235) leu-LName: L-Leucine
Formula: C6H13NO2
Charge: 0




click to see details on this item
+ (0.064161) lys-LName: L-Lysine
Formula: C6H15N2O2
Charge: 1




click to see details on this item
+ (0.028735) met-LName: L-Methionine
Formula: C5H11NO2S
Charge: 0




click to see details on this item
+ (0.034639) phe-LName: L-Phenylalanine
Formula: C9H11NO2
Charge: 0




click to see details on this item
+ (0.04133) pro-LName: L-Proline
Formula: C5H9NO2
Charge: 0




click to see details on this item
+ (0.040346) ser-LName: L-Serine
Formula: C3H7NO3
Charge: 0




click to see details on this item
+ (0.047432) thr-LName: L-Threonine
Formula: C4H9NO3
Charge: 0




click to see details on this item
+ (0.010628) trp-LName: L-Tryptophan
Formula: C11H12N2O2
Charge: 0




click to see details on this item
+ (0.025782) tyr-LName: L-Tyrosine
Formula: C9H11NO3
Charge: 0




click to see details on this item
+ (0.079118) val-LName: L-Valine
Formula: C5H11NO2
Charge: 0




click to see details on this item
Not determined
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(0.00625) mobdName: Molybdate
Formula: MoO4
Charge: -2




click to see details on this item
+ (0.00001) q8Name: Ubiquinone-8
Formula: C49H74O4
Charge: 0




click to see details on this item
+ (0.00016) thmName: Thiamin
Formula: C12H17N4OS
Charge: 1




click to see details on this item
+ (0.000903) thmppName: Thiamine diphosphate
Formula: C12H16N4O7P2S
Charge: -2




click to see details on this item
+ (0.00001) adocblName: Adenosylcobalamin
Formula: C72H100CoN18O17P
Charge: 0




click to see details on this item
+ (0.00001) selcysName: Selenocysteine
Formula: C3H7NO2Se
Charge: 0




click to see details on this item
+ (0.00001) cbl1Name: Cob(I)alamin
Formula: C62H88CoN13O14P
Charge: -1




click to see details on this item
+ (0.000443) ribflvName: Riboflavin
Formula: C17H20N4O6
Charge: 0




click to see details on this item
+ (0.000018) phemeName: Protoheme
Formula: C34H30FeN4O4
Charge: 0




click to see details on this item
+ (0.0001) pydxnName: Pyridoxine
Formula: C8H11NO3
Charge: 0




click to see details on this item
+ (0.000893) fe2Name: Fe2+
Formula: Fe
Charge: 2




click to see details on this item
+ (0.0001) pydamName: Pyridoxamine
Formula: C8H13N2O2
Charge: 1




click to see details on this item
+ (0.001172) fmnName: FMN
Formula: C17H19N4O9P
Charge: -2




click to see details on this item
+ (0.00001) folName: Folate
Formula: C19H18N7O6
Charge: -1




click to see details on this item
+ (0.004018) acornName: N2-Acetyl-L-ornithine
Formula: C7H14N2O3
Charge: 0




click to see details on this item
+ (0.00001) pnto-RName: (R)-Pantothenate
Formula: C9H16NO5
Charge: -1




click to see details on this item
+ (0.002774) fadName: Flavin adenine dinucleotide oxidized
Formula: C27H31N9O15P2
Charge: -2




click to see details on this item
+ (0.000102) pydxName: Pyridoxal
Formula: C8H9NO3
Charge: 0




click to see details on this item
+ (0.00001) tmaName: trimethylamine
Formula: C3H10N
Charge: 1




click to see details on this item
+ (0.00001) acserName: O-Acetyl-L-serine
Formula: C5H9NO4
Charge: 0




click to see details on this item
Not applicable
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To be determined
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