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(?) Enter a search word or phrase (left box), optionally select an appropriate field (middle), and hit the search button or press enter. This search engine is NOT case sensitive.

Use wild characters " ? " and " * " for efficient search:
  • ? : A single character. E.g., trehalose?phosphatase covers both trehalose phosphatase and trehalose-phosphatase, of which, only the latter fits the nomenclature used in this database.
  • * : Any number of characters. E.g.,tre-* brings all genes from trehalase family; coenzyme*A covers coenzyme A, coenzyme-A, and coenzymeA.
Network Biomass WormPaths
FBAFlux Balance Analysis PEAPathway Enrichment Analysis
WormClustClustering- and enrichment-based association of genes with the metabolic network
Metabolite Overview
Abbreviation ..................................................... : tma
Name ..................................................... : trimethylamine, etc.(CH3)3N, N,N-Dimethylmethanamine
Model ID ..................................................... : C00565
KEGG ID (?) Compounds in KEGG database that match this compound. ..................................................... : C00565
Formula ..................................................... : C3H10N
Charge ..................................................... : +1
Localization ..................................................... : Cytosol, Extracellular
BiGG matches (?) Compounds in BiGG database that match this compound. ..................................................... : tma
Other associations ..................................................... : See reaction table below.

In WormPaths (?) Pathway maps where this metabolite is represented are listed here.

Letters after map name indicate the compartments the metabolite is placed in the map:

(c) Cytosol
(m) Mitochondria
(e) Extracellular space
.....................................................
: Not yet represented in WormPaths maps.
Comments
ERROR
Reactions
ID Enzyme Reactants Products Genes (?) Multiple genes are separated by OR (I) or AND (&).

I indicates that genes are redundant within the group (e.g. paralogs encoding the same enzyme).
& indicates that genes are non-redundant within the group (e.g. genes encoding different subunits of the same enzyme).

If there are multiple groups of genes, as in an enzyme complex with some enzymes associated with multiple genes, or in a case where the same enzyme is associated with different orthology groups with paralogs, each group with multiple genes is shown in parentheses.
Pathway
Not applicable
(0.00625) mobdName: Molybdate
Formula: MoO4
Charge: -2




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+ (0.0002) q8Name: Ubiquinone-8
Formula: C49H74O4
Charge: 0




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+ (0.0002) thmName: Thiamin
Formula: C12H17N4OS
Charge: 1




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+ (0.000903) thmppName: Thiamine diphosphate
Formula: C12H16N4O7P2S
Charge: -2




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+ (0.0002) adocblName: Adenosylcobalamin
Formula: C72H100CoN18O17P
Charge: 0




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+ (0.0002) selcysName: Selenocysteine
Formula: C3H7NO2Se
Charge: 0




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+ (0.0002) cbl1Name: Cob(I)alamin
Formula: C62H88CoN13O14P
Charge: -1




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+ (0.000443) ribflvName: Riboflavin
Formula: C17H20N4O6
Charge: 0




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+ (0.0002) phemeName: Protoheme
Formula: C34H30FeN4O4
Charge: 0




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+ (0.0002) pydxnName: Pyridoxine
Formula: C8H11NO3
Charge: 0




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+ (0.000893) fe2Name: Fe2+
Formula: Fe
Charge: 2




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+ (0.0002) pydamName: Pyridoxamine
Formula: C8H13N2O2
Charge: 1




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+ (0.001172) fmnName: FMN
Formula: C17H19N4O9P
Charge: -2




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+ (0.0002) folName: Folate
Formula: C19H18N7O6
Charge: -1




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+ (0.004018) acornName: N2-Acetyl-L-ornithine
Formula: C7H14N2O3
Charge: 0




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+ (0.0002) pnto-RName: (R)-Pantothenate
Formula: C9H16NO5
Charge: -1




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+ (0.002774) fadName: Flavin adenine dinucleotide oxidized
Formula: C27H31N9O15P2
Charge: -2




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+ (0.0002) pydxName: Pyridoxal
Formula: C8H9NO3
Charge: 0




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+ (0.0002) tmaName: trimethylamine
Formula: C3H10N
Charge: 1




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+ (0.0002) acserName: O-Acetyl-L-serine
Formula: C5H9NO4
Charge: 0




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Not applicable
Not applicable
Not determined
Not applicable
Not applicable
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